Unreviewed, UniProtKB/TrEMBL Q9EQC2 (Q9EQC2_RAT)

Names and origin

Protein names

Submitted name:
    C-fos oncogene EMBL AAG47951.1

Gene names

Name:

Fos RGD 2626

Organism

Rattus norvegicus (Rat) EMBL AAG47951.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	111 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the bZIP family. RuleBase RU000470V2 Contains 1 bZIP domain. Spearmint SPM000837

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU000470V2 Spearmint SPM000837
Ligand	DNA-binding RuleBase RU000470V2 Spearmint SPM000837
Gene Ontology (GO)
Biological process	aging Inferred from expression pattern. Source: RGD cellular response to extracellular stimulus Inferred from electronic annotation. Source: Compara cellular response to hormone stimulus Inferred from expression pattern. Source: RGD conditioned taste aversion Inferred from expression pattern. Source: RGD female pregnancy Inferred from expression pattern. Source: RGD nervous system development Inferred from electronic annotation. Source: Compara positive regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara response to cAMP Inferred from expression pattern. Source: RGD response to cold Inferred from expression pattern. Source: RGD response to corticosterone stimulus Inferred from expression pattern. Source: RGD response to cytokine stimulus Inferred from expression pattern. Source: RGD response to drug Inferred from expression pattern. Source: RGD response to gravity Inferred from expression pattern. Source: RGD response to light stimulus Inferred from expression pattern. Source: RGD response to lipopolysaccharide Inferred from expression pattern. Source: RGD response to mechanical stimulus Inferred from expression pattern. Source: RGD response to organic cyclic substance Inferred from expression pattern. Source: RGD response to progesterone stimulus Inferred from expression pattern. Source: RGD response to toxin Inferred from expression pattern. Source: RGD sleep Inferred from expression pattern. Source: RGD transcription from RNA polymerase II promoter Inferred from mutant phenotype. Source: RGD
Cellular component	synaptosome Inferred from direct assay. Source: RGD transcription factor complex Inferred from electronic annotation. Source: Compara
Molecular function	double-stranded DNA binding Inferred from direct assay. Source: RGD protein heterodimerization activity Inferred by curator. Source: RGD sequence-specific DNA binding Inferred from direct assay. Source: RGD transcription factor activity Inferred from mutant phenotype. Source: RGD
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAG47951.1
	Non-terminal residue	111	1	EMBL AAG47951.1

Sequences

	Sequence		Length	Mass (Da)
	Q9EQC2-1 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 655694096DAA6C4D	FASTA	111	12,705
	10 20 30 40 50 60 KREEKRRIRR ERNKMAAAKC RNRRRELTDT LQAETDQLED EKSALQTEIA NLLKEKEKLE 70 80 90 100 110 FILAAHRPAC KIPNDLGFPE EMSVTSLDLT GGLPEATTPE SEEAFTLPLL N

References

[1]

"Induction of unspliced C-FOS mRNA in rodent brain by kainic acid and lipopolysaccharide (LPS)." Feng Z., Kong L.-Y., Qi Q., Ho S.-L., Tiao N., Bing G., Han Y. Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: F344 EMBL AAG47951.1. Tissue: Brain EMBL AAG47951.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF277645 Genomic DNA. Translation: AAG47951.1.
IPI	IPI00368000.
UniGene	Rn.103750
3D structure databases
HSSP	HSSP built from PDB template 1FOS based on UniProtKB P01100.
SMR	Q9EQC2. Positions 5-64.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9EQC2.
Genome annotation databases
Ensembl	ENSRNOT00000010712; ENSRNOP00000010712; ENSRNOG00000008015; Rattus norvegicus. [Genome view]
Phylogenomic databases
HOVERGEN	Q9EQC2.
Gene expression databases
ArrayExpress	Q9EQC2.
Genevestigator	Q9EQC2.
Family and domain databases
InterPro	IPR011616. bZIP_1. IPR000837. Leuzip_Fos. IPR004827. TF_bZIP. [Graphical view]
Pfam	PF00170. bZIP_1. 1 hit. [Graphical view]
PRINTS	PR00042. LEUZIPPRFOS.
SMART	SM00338. BRLZ. 1 hit. [Graphical view]
PROSITE	PS50217. BZIP. 1 hit. PS00036. BZIP_BASIC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9EQC2_RAT

Accession

Primary (citable) accession number: Q9EQC2

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	November 3, 2009
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)