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Protein

Ubiquitin-like protein 5

Gene

Ubl5

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Ubl conjugation pathway

Names & Taxonomyi

Protein namesi
Recommended name:
Ubiquitin-like protein 5
Gene namesi
Name:Ubl5
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 9

Organism-specific databases

MGIiMGI:1913427. Ubl5.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7373Ubiquitin-like protein 5PRO_0000114868Add
BLAST

Proteomic databases

EPDiQ9EPV8.
MaxQBiQ9EPV8.
PaxDbiQ9EPV8.
PRIDEiQ9EPV8.

PTM databases

iPTMnetiQ9EPV8.
PhosphoSiteiQ9EPV8.

Expressioni

Gene expression databases

BgeeiENSMUSG00000084786.
CleanExiMM_UBL5.
ExpressionAtlasiQ9EPV8. baseline and differential.
GenevisibleiQ9EPV8. MM.

Interactioni

Subunit structurei

Interacts with CLK1, CLK3 and CLK4.By similarity

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000123971.

Structurei

Secondary structure

73
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi1 – 77Combined sources
Beta strandi9 – 124Combined sources
Beta strandi14 – 196Combined sources
Helixi24 – 3512Combined sources
Helixi39 – 413Combined sources
Beta strandi43 – 464Combined sources
Helixi57 – 604Combined sources
Beta strandi66 – 716Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1UH6NMR-A1-73[»]
ProteinModelPortaliQ9EPV8.
SMRiQ9EPV8. Positions 1-73.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9EPV8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 7373Ubiquitin-likeAdd
BLAST

Sequence similaritiesi

Contains 1 ubiquitin-like domain.Curated

Phylogenomic databases

eggNOGiKOG3493. Eukaryota.
ENOG4111UT0. LUCA.
GeneTreeiENSGT00390000001945.
HOGENOMiHOG000234933.
HOVERGENiHBG055994.
InParanoidiQ9EPV8.
PhylomeDBiQ9EPV8.
TreeFamiTF318874.

Family and domain databases

InterProiIPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
[Graphical view]
PfamiPF00240. ubiquitin. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9EPV8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIEVVCNDRL GKKVRVKCNT DDTIGDLKKL IAAQTGTRWN KIVLKKWYTI
60 70
FKDHVSLGDY EIHDGMNLEL YYQ
Length:73
Mass (Da):8,547
Last modified:March 1, 2001 - v1
Checksum:iD68BC941536AA39F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK002730 mRNA. Translation: BAB22312.1.
AK003992 mRNA. Translation: BAB23111.1.
AK007726 mRNA. Translation: BAB25215.1.
AK009854 mRNA. Translation: BAB26545.1.
AK012803 mRNA. Translation: BAB28481.1.
AK051149 mRNA. Translation: BAC34537.1.
BC028498 mRNA. Translation: AAH28498.1.
CCDSiCCDS52733.1.
RefSeqiNP_079677.1. NM_025401.3.
XP_006510607.1. XM_006510544.1.
UniGeneiMm.390165.

Genome annotation databases

EnsembliENSMUST00000129414; ENSMUSP00000123971; ENSMUSG00000084786.
ENSMUST00000160124; ENSMUSP00000125364; ENSMUSG00000084786.
ENSMUST00000160682; ENSMUSP00000124672; ENSMUSG00000084786.
ENSMUST00000162303; ENSMUSP00000124812; ENSMUSG00000084786.
GeneIDi66177.
UCSCiuc009ojc.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK002730 mRNA. Translation: BAB22312.1.
AK003992 mRNA. Translation: BAB23111.1.
AK007726 mRNA. Translation: BAB25215.1.
AK009854 mRNA. Translation: BAB26545.1.
AK012803 mRNA. Translation: BAB28481.1.
AK051149 mRNA. Translation: BAC34537.1.
BC028498 mRNA. Translation: AAH28498.1.
CCDSiCCDS52733.1.
RefSeqiNP_079677.1. NM_025401.3.
XP_006510607.1. XM_006510544.1.
UniGeneiMm.390165.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1UH6NMR-A1-73[»]
ProteinModelPortaliQ9EPV8.
SMRiQ9EPV8. Positions 1-73.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000123971.

PTM databases

iPTMnetiQ9EPV8.
PhosphoSiteiQ9EPV8.

Proteomic databases

EPDiQ9EPV8.
MaxQBiQ9EPV8.
PaxDbiQ9EPV8.
PRIDEiQ9EPV8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000129414; ENSMUSP00000123971; ENSMUSG00000084786.
ENSMUST00000160124; ENSMUSP00000125364; ENSMUSG00000084786.
ENSMUST00000160682; ENSMUSP00000124672; ENSMUSG00000084786.
ENSMUST00000162303; ENSMUSP00000124812; ENSMUSG00000084786.
GeneIDi66177.
UCSCiuc009ojc.1. mouse.

Organism-specific databases

CTDi59286.
MGIiMGI:1913427. Ubl5.

Phylogenomic databases

eggNOGiKOG3493. Eukaryota.
ENOG4111UT0. LUCA.
GeneTreeiENSGT00390000001945.
HOGENOMiHOG000234933.
HOVERGENiHBG055994.
InParanoidiQ9EPV8.
PhylomeDBiQ9EPV8.
TreeFamiTF318874.

Miscellaneous databases

EvolutionaryTraceiQ9EPV8.
PROiQ9EPV8.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000084786.
CleanExiMM_UBL5.
ExpressionAtlasiQ9EPV8. baseline and differential.
GenevisibleiQ9EPV8. MM.

Family and domain databases

InterProiIPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
[Graphical view]
PfamiPF00240. ubiquitin. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiUBL5_MOUSE
AccessioniPrimary (citable) accession number: Q9EPV8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 13, 2004
Last sequence update: March 1, 2001
Last modified: September 7, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.