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Protein
Submitted name:

Twist family bHLH transcription factor 1

Gene

Twist1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Twist family bHLH transcription factor 1Imported
Submitted name:
Twist homolog 1 (Drosophila)Imported
Submitted name:
Twist proteinImported
Gene namesi
Name:Twist1Imported
Synonyms:TwistImported, twistImported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi621455. Twist1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000011101.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000014763.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini109 – 160BHLHInterPro annotationAdd BLAST52

Phylogenomic databases

eggNOGiKOG4447. Eukaryota.
ENOG4111QFU. LUCA.
GeneTreeiENSGT00760000119097.
HOGENOMiHOG000261629.
HOVERGENiHBG019071.
KOiK09069.
OMAiDRQPKRC.
OrthoDBiEOG091G07PB.
TreeFamiTF315153.

Family and domain databases

CDDicd00083. HLH. 1 hit.
Gene3Di4.10.280.10. 1 hit.
InterProiView protein in InterPro
IPR011598. bHLH_dom.
IPR015789. Twist-related.
PANTHERiPTHR23349:SF88. PTHR23349:SF88. 1 hit.
PfamiView protein in Pfam
PF00010. HLH. 1 hit.
SMARTiView protein in SMART
SM00353. HLH. 1 hit.
SUPFAMiSSF47459. SSF47459. 1 hit.
PROSITEiView protein in PROSITE
PS50888. BHLH. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9EPJ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMQDVSSSPV SPADDSLSNS EEEPDRQQPA SGKRGARKRR SSRRSAGGSA
60 70 80 90 100
GPGGATGGGI GGGDEPGSPA QGKRGKKSAG GGGGAGGGGG GGGSSSGGGS
110 120 130 140 150
PQSYEELQTQ RVMANVRERQ RTQSLNEAFA ALRKIIPTLP SDKLSKIQTL
160 170 180 190 200
KLAARYIDFL YQVLQSDELD SKMASCSYVA HERLSYAFSV WRMEGAWSMS

ASH
Length:203
Mass (Da):21,027
Last modified:March 1, 2001 - v1
Checksum:iB77B48A9DBE98816
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07063875 Genomic DNA. No translation available.
BC166412 mRNA. Translation: AAI66412.1.
AJ131845 Genomic DNA. Translation: CAC20861.1.
RefSeqiNP_445982.1. NM_053530.2.
UniGeneiRn.161904.

Genome annotation databases

EnsembliENSRNOT00000014763; ENSRNOP00000014763; ENSRNOG00000011101.
GeneIDi85489.
KEGGirno:85489.

Similar proteinsi

Entry informationi

Entry nameiQ9EPJ1_RAT
AccessioniPrimary (citable) accession number: Q9EPJ1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: September 27, 2017
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported