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Protein
Submitted name:

Kv1.3 voltage-gated potassium channel

Gene

Kcna3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIon channelImported
Biological processIon transport, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Kv1.3 voltage-gated potassium channelImported
Gene namesi
Name:Kcna3Imported
Synonyms:kcna3Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi2951. Kcna3.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei123 – 143HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSRNOG00000018116.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024372.

Structurei

3D structure databases

ProteinModelPortaliQ9EPB0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 87BTB_2InterPro annotationAdd BLAST87

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1545. Eukaryota.
COG1226. LUCA.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
InterProiView protein in InterPro
IPR027359. Channel_four-helix_dom.
IPR003972. K_chnl_volt-dep_Kv1.
IPR011333. SKP1/BTB/POZ.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
PANTHERiPTHR11537. PTHR11537. 1 hit.
PfamiView protein in Pfam
PF02214. BTB_2. 1 hit.
PRINTSiPR00169. KCHANNEL.
PR01496. SHAKERCHANEL.
SUPFAMiSSF54695. SSF54695. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q9EPB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
SGLRFETQLK TLCQFPETLL GDPKRRMRYF DPLRNEYFFD RNRPSFDAIL
60 70 80 90 100
YYYQSGGRIR RPVNVPIDIF SEEIRFYQLG EEAMEKFRED EGFLREEERP
110 120 130 140 150
LPRRDFQRQV WLLFEYPESS GPARGIAIVS VLVILISIVI FCLETLPEFR

DEKDYPASP
Length:159
Mass (Da):19,002
Last modified:March 1, 2001 - v1
Checksum:i404A18B94DFF8C88
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei159Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ276135 mRNA. Translation: CAC03590.1.
AJ276136 mRNA. Translation: CAC03591.1.
AJ276138 mRNA. Translation: CAC03593.1.
UniGeneiRn.44292.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ276135 mRNA. Translation: CAC03590.1.
AJ276136 mRNA. Translation: CAC03591.1.
AJ276138 mRNA. Translation: CAC03593.1.
UniGeneiRn.44292.

3D structure databases

ProteinModelPortaliQ9EPB0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024372.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi2951. Kcna3.

Phylogenomic databases

eggNOGiKOG1545. Eukaryota.
COG1226. LUCA.

Gene expression databases

BgeeiENSRNOG00000018116.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
InterProiView protein in InterPro
IPR027359. Channel_four-helix_dom.
IPR003972. K_chnl_volt-dep_Kv1.
IPR011333. SKP1/BTB/POZ.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
PANTHERiPTHR11537. PTHR11537. 1 hit.
PfamiView protein in Pfam
PF02214. BTB_2. 1 hit.
PRINTSiPR00169. KCHANNEL.
PR01496. SHAKERCHANEL.
SUPFAMiSSF54695. SSF54695. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9EPB0_RAT
AccessioniPrimary (citable) accession number: Q9EPB0
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: November 2, 2016
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.