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Q9E8F1

- NSP6_ROTRF

UniProt

Q9E8F1 - NSP6_ROTRF

Protein

Non-structural protein 6

Gene
N/A
Organism
Rotavirus A (strain Cow/France/RF/1975 G6-P6[1]-I2-R2-C2-M2-A3-N2-T6-E2-H3) (RV-A)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Non-structural protein 6
    Short name:
    NSP6
    OrganismiRotavirus A (strain Cow/France/RF/1975 G6-P6[1]-I2-R2-C2-M2-A3-N2-T6-E2-H3) (RV-A)
    Taxonomic identifieri10933 [NCBI]
    Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusRotavirus A
    Virus hostiBos taurus (Bovine) [TaxID: 9913]
    ProteomesiUP000007179: Genome

    Subcellular locationi

    Host cytoplasm
    Note: Found in spherical cytoplasmic structures, called virus factories, that appear early after infection and are the site of viral replication and packaging.By similarity

    GO - Cellular componenti

    1. host cell cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Host cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 9898Non-structural protein 6PRO_0000369513Add
    BLAST

    Interactioni

    Subunit structurei

    Interacts with NSP5.By similarity

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the rotavirus A NSP6 family.Curated

    Family and domain databases

    InterProiIPR006950. Rotavirus_NSP6.
    [Graphical view]
    PfamiPF04866. Rota_NS6. 1 hit.
    [Graphical view]
    ProDomiPD008065. Rota_NS6. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    Q9E8F1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNHLQQRQLF LENLLVGVNS TFHQMQKHSV NTCCQSLQKI LDHLILLQTI   50
    HSPAFRLDRM QLRQMQTLAC LWIHQHNHGH QAMLGAIKWI SPLIKELV 98
    Length:98
    Mass (Da):11,496
    Last modified:March 1, 2001 - v1
    Checksum:i9E8DE999AF6EC6BC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF188126 mRNA. Translation: AAG15312.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF188126 mRNA. Translation: AAG15312.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR006950. Rotavirus_NSP6.
    [Graphical view ]
    Pfami PF04866. Rota_NS6. 1 hit.
    [Graphical view ]
    ProDomi PD008065. Rota_NS6. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "Expression of nsp6 by RF strain of rotavirus A."
      Duarte M., Castagne N., Ponce D.
      Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].

    Entry informationi

    Entry nameiNSP6_ROTRF
    AccessioniPrimary (citable) accession number: Q9E8F1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3