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Q9E7N7 (VP4A_LNYV3) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Phosphoprotein

Short name=Protein P
Alternative name(s):
Protein 4a
Gene names
Name:P
OrganismLettuce necrotic yellows virus (isolate 318) (LNYV) [Reference proteome]
Taxonomic identifier928304 [NCBI]
Taxonomic lineageVirusesssRNA negative-strand virusesMononegaviralesRhabdoviridaeCytorhabdovirus
Virus hostEmbergeria [TaxID: 43191]
Lactuca sativa (Garden lettuce) [TaxID: 4236]
Reichardia tingitana [TaxID: 43208]
Sonchus hydrophilus [TaxID: 255580]
Sonchus oleraceus (Common sowthistle) [TaxID: 50207]

Protein attributes

Sequence length300 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Non catalytic polymerase cofactor and regulatory protein that plays a role in viral transcription and replication. Stabilizes the RNA polymerase L to the N-RNA template and binds the soluble protein N, preventing it from encapsidating non-genomic RNA By similarity.

Subunit structure

Homotrimer when phosphorylated. This trimer is stabilized by binding to the L protein. Binds soluble protein N, and ribonucleocapsid By similarity.

Subcellular location

Virion. Host cytoplasm By similarity.

Post-translational modification

Phosphorylated by host kinases By similarity.

Ontologies

Keywords
   Biological processViral RNA replication
   Cellular componentHost cytoplasm
Virion
   Molecular functionChaperone
   PTMPhosphoprotein
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componenthost cell cytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

virion

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 300300Phosphoprotein
PRO_0000299209

Secondary structure

........... 300
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q9E7N7 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: C64041C7E1E2FBDA

FASTA30032,499
        10         20         30         40         50         60 
MDSESLDFSS ADTVILRSPN AGTNPDGHPD TVECPDFDTD IPKTSDDSSK MDNKGSSSSS 

        70         80         90        100        110        120 
KAVKDLLELA AKSQGIVVTD VMQNTAIALH HNLGLDASSL DWFVAGITFA NNSMIMEKMV 

       130        140        150        160        170        180 
SAIKELQIEV RNIQVASSGI KGTSEELVSK MKANKNDIVK ELVKTRDSVL SAMGGILSAP 

       190        200        210        220        230        240 
EIEQQPVKTV TIGASQGRRK STVVPPIEIN PELESPVLSK TVSTATPEER IRHEKEKLLA 

       250        260        270        280        290        300 
DLDWEIGEIA QYTPLIVDFL VPDDILAMAA DGLTPELKEK IQNEIIENHI ALMALEEYSS 

« Hide

References

[1]"Completion of the genome sequence of Lettuce necrotic yellows virus, type species of the genus Cytorhabdovirus."
Dietzgen R.G., Callaghan B., Wetzel T., Dale J.L.
Virus Res. 118:16-22(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA / MRNA].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF209035 mRNA. Translation: AAG32648.1.
AJ867584 Genomic RNA. Translation: CAI30422.1.
RefSeqYP_425088.1. NC_007642.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3T4RX-ray2.00A230-300[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3844365.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameVP4A_LNYV3
AccessionPrimary (citable) accession number: Q9E7N7
Entry history
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: March 1, 2001
Last modified: May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

PDB cross-references

Index of Protein Data Bank (PDB) cross-references