Q9E3V8 (Q9E3V8_9REOV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: VP3 EMBL AAG10437.1
Organism	Grass carp reovirus EMBL AAG10437.1
Taxonomic identifier	128987 [NCBI]
Taxonomic lineage	Viruses › dsRNA viruses › Reoviridae › Spinareovirinae › Aquareovirus › Aquareovirus C

Protein attributes

Sequence length	1214 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 3IYL PDB 3K1Q
Gene Ontology (GO)
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9E3V8 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: B70514760A58B203	FASTA	1,214	132,099
	10 20 30 40 50 60 MPRRSARKAQ SAIASPADTN VVPAKDAPTT NSPPSTTSPN QAAADANQQQ AGIVSSQSGP 70 80 90 100 110 120 NAVGDSAPSS SVNNDGDIIT RPTSDSIAAV ANATKPAAVV SDPQSMKVTP IVNPSSYVCN 130 140 150 160 170 180 VCNARFSTMS ALSEHLRSDH RDDASTLLAT PMINNAIRSF LTAWDDIRIL SPDVSSKSLS 190 200 210 220 230 240 AYLDSAVANG PELIIEDTGL CTSFMLLDNI PSAHLTKELI GFTWFMQMYQ MTPPLPEGAV 250 260 270 280 290 300 NRIVCMTNWA SLGDEGRGLE VRLPPPTDSS VHAYKTVLSR GYIDNAQFNP LALRSNVLLM 310 320 330 340 350 360 LLQFTLSNLK INKSSTFTSD VTTITSGRMI RAFEGRPELL ALAYPGRAVL PTQTKNAQFL 370 380 390 400 410 420 STAIADRIGR LDRANLIGGE VSAMVECMEL CDALTLHIRE TYIMLLRSMH QDPTQIVQIV 430 440 450 460 470 480 NECANNLLNS TIPISLRPTI LCPWFASSED LRLQQVMHLV NISSNTAAAL PLVEALSTLL 490 500 510 520 530 540 RSVTPLVLDP TVLTNAITTI SESTTQTISP ISEILRLLQP MGNDYAAFWK CIASWAYNGL 550 560 570 580 590 600 VTTVLSEDAF PDSSQSITHL PSMWKCLFLT LAGPMTSDPH SPVKVFMALA NLLAQPEPIA 610 620 630 640 650 660 IGVPGMHQTT PASQFSHPGV WPPGFLNPQL INPQQAPLLR AFAEHIRANW PQPSEFGYGS 670 680 690 700 710 720 TLQGSANLFI PSNRMVYPWP NQPLPRLTVA PTYDSAMSNW ISTTIAFFIR VVNSVNMTAT 730 740 750 760 770 780 VNDLTRRTMT GVMTAMRQVK TMTPFYIQHM CPTELSVLAS VTVTPPFQVP FTRLVQNDVI 790 800 810 820 830 840 TNVLVARVDP AQRGDAAVDI RATHATFAAA LPVDPAAIVV AMLCGQTETN LIPSHHYGKA 850 860 870 880 890 900 FAPLFASNAM FTRNQRAVIT REAFVCARSA VAQCQDAGFL VPRPLDALRQ FDVTSAAAAE 910 920 930 940 950 960 IMHAVNDAFK TAFDLDGALL DGLALYGDPR IADLSAAYLQ YGGNVVREHV PPGPSHIHRA 970 980 990 1000 1010 1020 LQQVESTFMA EMNLFNVARG NLYLVQTATN GNWSPMAPVA APPFVRGGPN VRVVGRFGTI 1030 1040 1050 1060 1070 1080 VPRPNGLEPQ LIDDGNVPRD IAGDWVYPSD VLQVSVAVFR DYVWPMVKAG RTRVLVELGH 1090 1100 1110 1120 1130 1140 YVYTLHYYDP QISLDEAPIL EEWLSKINPA GIPPVPFCIP IPQVYPCITA RRVHYAFTSE 1150 1160 1170 1180 1190 1200 NNNDSLFSTN AASIDTAFGE NAAVSPLRWP GLVDPNYRVG TNDLPNRITL YNSLYRYNFT 1210 YPTLDGIMYV RSAT

References

[1]	"Sequence of genome segments 1, 2, and 3 of the grass carp reovirus (Genus Aquareovirus, family Reoviridae)." Fang Q., Attoui H., Cantaloube J.F., Biagini P., Zhu Z., de Micco P., de Lamballerie X. Biochem. Biophys. Res. Commun. 274:762-766(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry." Zhang X., Jin L., Fang Q., Hui W.H., Zhou Z.H. Cell 141:472-482(2010) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.30 ANGSTROMS).
[3]	"Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics." Cheng L., Zhu J., Hui W.H., Zhang X., Honig B., Fang Q., Zhou Z.H. J. Mol. Biol. 397:852-863(2010) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.50 ANGSTROMS) OF 188-1214 AND 19-1214.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AF260513 Genomic RNA. Translation: AAG10437.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3IYL	electron microscopy	3.30	X/Y	1-1214	[»]
3K1Q	electron microscopy	4.50	B	188-1214	[»]
			C	19-1214	[»]

ProteinModelPortal

Q9E3V8.

ModBase

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Protocols and materials databases

StructuralBiologyKnowledgebase

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Family and domain databases

InterPro

IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]

SMART

SM00355. ZnF_C2H2. 1 hit.
[Graphical view]

PROSITE

PS00028. ZINC_FINGER_C2H2_1. 1 hit.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]

ProtoNet

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Other

EvolutionaryTrace

Q9E3V8.

Entry information

Entry name

Q9E3V8_9REOV

Accession

Primary (citable) accession number: Q9E3V8

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	April 3, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)