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Protein
Submitted name:

VP3

Gene
N/A
Organism
Grass carp reovirus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
VP3Imported
OrganismiGrass carp reovirusImported
Taxonomic identifieri128987 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSpinareovirinaeAquareovirus

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3IYLelectron microscopy3.30X/Y1-1214[»]
3K1Qelectron microscopy4.50B188-1214[»]
C19-1214[»]
ProteinModelPortaliQ9E3V8.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9E3V8.

Family & Domainsi

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 1 hit.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 1 hit.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9E3V8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRRSARKAQ SAIASPADTN VVPAKDAPTT NSPPSTTSPN QAAADANQQQ
60 70 80 90 100
AGIVSSQSGP NAVGDSAPSS SVNNDGDIIT RPTSDSIAAV ANATKPAAVV
110 120 130 140 150
SDPQSMKVTP IVNPSSYVCN VCNARFSTMS ALSEHLRSDH RDDASTLLAT
160 170 180 190 200
PMINNAIRSF LTAWDDIRIL SPDVSSKSLS AYLDSAVANG PELIIEDTGL
210 220 230 240 250
CTSFMLLDNI PSAHLTKELI GFTWFMQMYQ MTPPLPEGAV NRIVCMTNWA
260 270 280 290 300
SLGDEGRGLE VRLPPPTDSS VHAYKTVLSR GYIDNAQFNP LALRSNVLLM
310 320 330 340 350
LLQFTLSNLK INKSSTFTSD VTTITSGRMI RAFEGRPELL ALAYPGRAVL
360 370 380 390 400
PTQTKNAQFL STAIADRIGR LDRANLIGGE VSAMVECMEL CDALTLHIRE
410 420 430 440 450
TYIMLLRSMH QDPTQIVQIV NECANNLLNS TIPISLRPTI LCPWFASSED
460 470 480 490 500
LRLQQVMHLV NISSNTAAAL PLVEALSTLL RSVTPLVLDP TVLTNAITTI
510 520 530 540 550
SESTTQTISP ISEILRLLQP MGNDYAAFWK CIASWAYNGL VTTVLSEDAF
560 570 580 590 600
PDSSQSITHL PSMWKCLFLT LAGPMTSDPH SPVKVFMALA NLLAQPEPIA
610 620 630 640 650
IGVPGMHQTT PASQFSHPGV WPPGFLNPQL INPQQAPLLR AFAEHIRANW
660 670 680 690 700
PQPSEFGYGS TLQGSANLFI PSNRMVYPWP NQPLPRLTVA PTYDSAMSNW
710 720 730 740 750
ISTTIAFFIR VVNSVNMTAT VNDLTRRTMT GVMTAMRQVK TMTPFYIQHM
760 770 780 790 800
CPTELSVLAS VTVTPPFQVP FTRLVQNDVI TNVLVARVDP AQRGDAAVDI
810 820 830 840 850
RATHATFAAA LPVDPAAIVV AMLCGQTETN LIPSHHYGKA FAPLFASNAM
860 870 880 890 900
FTRNQRAVIT REAFVCARSA VAQCQDAGFL VPRPLDALRQ FDVTSAAAAE
910 920 930 940 950
IMHAVNDAFK TAFDLDGALL DGLALYGDPR IADLSAAYLQ YGGNVVREHV
960 970 980 990 1000
PPGPSHIHRA LQQVESTFMA EMNLFNVARG NLYLVQTATN GNWSPMAPVA
1010 1020 1030 1040 1050
APPFVRGGPN VRVVGRFGTI VPRPNGLEPQ LIDDGNVPRD IAGDWVYPSD
1060 1070 1080 1090 1100
VLQVSVAVFR DYVWPMVKAG RTRVLVELGH YVYTLHYYDP QISLDEAPIL
1110 1120 1130 1140 1150
EEWLSKINPA GIPPVPFCIP IPQVYPCITA RRVHYAFTSE NNNDSLFSTN
1160 1170 1180 1190 1200
AASIDTAFGE NAAVSPLRWP GLVDPNYRVG TNDLPNRITL YNSLYRYNFT
1210
YPTLDGIMYV RSAT
Length:1,214
Mass (Da):132,099
Last modified:February 28, 2001 - v1
Checksum:iB70514760A58B203
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF260513 Genomic RNA. Translation: AAG10437.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF260513 Genomic RNA. Translation: AAG10437.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3IYLelectron microscopy3.30X/Y1-1214[»]
3K1Qelectron microscopy4.50B188-1214[»]
C19-1214[»]
ProteinModelPortaliQ9E3V8.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ9E3V8.

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 1 hit.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 1 hit.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence of genome segments 1, 2, and 3 of the grass carp reovirus (Genus Aquareovirus, family Reoviridae)."
    Fang Q., Attoui H., Cantaloube J.F., Biagini P., Zhu Z., de Micco P., de Lamballerie X.
    Biochem. Biophys. Res. Commun. 274:762-766(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry."
    Zhang X., Jin L., Fang Q., Hui W.H., Zhou Z.H.
    Cell 141:472-482(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.30 ANGSTROMS), ACTIVE SITE.
  3. "Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics."
    Cheng L., Zhu J., Hui W.H., Zhang X., Honig B., Fang Q., Zhou Z.H.
    J. Mol. Biol. 397:852-863(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.50 ANGSTROMS) OF 188-1214 AND 19-1214.

Entry informationi

Entry nameiQ9E3V8_9REOV
AccessioniPrimary (citable) accession number: Q9E3V8
Entry historyi
Integrated into UniProtKB/TrEMBL: February 28, 2001
Last sequence update: February 28, 2001
Last modified: January 6, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.