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Q9DIC6

- VGLG_LNYV3

UniProt

Q9DIC6 - VGLG_LNYV3

Protein

Glycoprotein G

Gene

G

Organism
Lettuce necrotic yellows virus (isolate 318) (LNYV)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (01 Mar 2001)
      Previous versions | rss
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    Functioni

    Attaches the virus to host cellular receptor, inducing endocytosis of the virion. In the endosome, the acidic pH induces conformational changes in the glycoprotein trimer, which trigger fusion between virus and cell membrane By similarity.By similarity

    GO - Biological processi

    1. viral entry into host cell Source: UniProtKB-KW
    2. virion attachment to host cell Source: UniProtKB-KW

    Keywords - Biological processi

    Host-virus interaction, Viral attachment to host cell, Virus entry into host cell

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycoprotein G
    Gene namesi
    Name:G
    OrganismiLettuce necrotic yellows virus (isolate 318) (LNYV)
    Taxonomic identifieri928304 [NCBI]
    Taxonomic lineageiVirusesssRNA negative-strand virusesMononegaviralesRhabdoviridaeCytorhabdovirus
    Virus hostiEmbergeria [TaxID: 43191]
    Lactuca sativa (Garden lettuce) [TaxID: 4236]
    Reichardia tingitana [TaxID: 43208]
    Sonchus hydrophilus [TaxID: 255580]
    Sonchus oleraceus (Common sowthistle) [TaxID: 50207]
    ProteomesiUP000008592: Genome

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. viral envelope Source: UniProtKB-KW
    3. virion membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Membrane, Viral envelope protein, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525Sequence AnalysisAdd
    BLAST
    Chaini26 – 551526Glycoprotein GPRO_5000065805Add
    BLAST

    Post-translational modificationi

    Glycosylated by host. Glycosylation is crucial for glycoprotein export at the cell surface By similarity.By similarity

    Keywords - PTMi

    Glycoprotein

    Interactioni

    Subunit structurei

    Homotrimer. Interacts with matrix protein By similarity.By similarity

    Structurei

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini26 – 503478Virion surfaceSequence AnalysisAdd
    BLAST
    Topological domaini525 – 55127IntravirionSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei504 – 52421HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal, Transmembrane, Transmembrane helix

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9DIC6-1 [UniParc]FASTAAdd to Basket

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    MVSKITLLCF AITCDVLISM GTVQGVFNHS VGPLAVCSPD MEDARAYTEN    50
    CYRRCSRNKE PSTHGYVWLY SDTAPKGGPV VTRCNKVRVK QVFTETWSFS 100
    FIKGTPTRMT LDVTEAECVA VMRSQCPTHN CNIKAPSELP EEYHYASDTE 150
    VVQDYLEILS MPSGLDYMEE NLRITPSQSK FSFQLTDGKG QEGQYIYFWD 200
    TKYDDTKCPF DSFQSHGCDK YDSPLDLINC RESRFVIPSI ANSTTLVGAC 250
    QGLQKSTTGL IYKWDDRPDS IANDSKRIAL TKNDQTAGNV ATLRVLVADS 300
    LNAVDEDLCH TQCEMLDFIL RSDRKREVLT RIGGSYLVVS KTSYIRQCRP 350
    LVGCRIVKPH YFCGNPNRVA IICHGKVWYW DPLKSYVDEG MNCERRVAGT 400
    KLVFAVGNHE YAIDDDMHVE LPEHETYGIS HDLLASSEDR ISKDIVDPTE 450
    LRNSWQSHIA KEGRMSIEPL SQDKQVSHWD AEFSNPLTWL TSAGGWILDM 500
    SHKVTLWATV FLTLGALVAG AKVWEIMRKA NRKSQYKRTN TEPHDSQATW 550
    I 551
    Length:551
    Mass (Da):62,317
    Last modified:March 1, 2001 - v1
    Checksum:i838FA34080A37F98
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ251533 Genomic RNA. Translation: CAC18651.1.
    AJ867584 Genomic RNA. Translation: CAI30425.1.
    RefSeqiYP_425091.1. NC_007642.1.

    Genome annotation databases

    GeneIDi3844361.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ251533 Genomic RNA. Translation: CAC18651.1 .
    AJ867584 Genomic RNA. Translation: CAI30425.1 .
    RefSeqi YP_425091.1. NC_007642.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 3844361.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Completion of the genome sequence of Lettuce necrotic yellows virus, type species of the genus Cytorhabdovirus."
      Dietzgen R.G., Callaghan B., Wetzel T., Dale J.L.
      Virus Res. 118:16-22(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiVGLG_LNYV3
    AccessioniPrimary (citable) accession number: Q9DIC6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 11, 2007
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3