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Protein

Probable capsid and replication-associated protein

Gene

ORF1

Organism
Torque teno virus (strain VT416) (TTV)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May self assemble to form an icosahedral capsid. Presumably essential to initiate and monitor viral genome replication by a rolling circle mechanism.

GO - Biological processi

Keywordsi

Biological processDNA replication

Names & Taxonomyi

Protein namesi
Recommended name:
Probable capsid and replication-associated protein
Gene namesi
ORF Names:ORF1
OrganismiTorque teno virus (strain VT416) (TTV)
Taxonomic identifieri486280 [NCBI]
Taxonomic lineageiVirusesssDNA virusesAnelloviridaeunclassified Anelloviridae
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000001448 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, T=1 icosahedral capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003153261 – 770Probable capsid and replication-associated proteinAdd BLAST770

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi7 – 82Arg-richAdd BLAST76

Sequence similaritiesi

Phylogenomic databases

OrthoDBiVOG0900003O

Family and domain databases

InterProiView protein in InterPro
IPR004219 TTvirus_Unk
PfamiView protein in Pfam
PF02956 TT_ORF1, 1 hit

Sequencei

Sequence statusi: Complete.

Q9DHA8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYGWWRRRR RRWRRWRRRP WRRRWRTRRR RPARRRGRRR NVRRRRRGGR
60 70 80 90 100
WRRRYRRWKR KGRRRKKAKI IIRQWQPNYR RRCNIVGYIP VLICGENTVS
110 120 130 140 150
RNYATHSDDT NYPGPLGGGM TTDKFTLRIL YDEYKRFMNY WTASNEDLDL
160 170 180 190 200
CRYLGVNMYF FRHPDVDFII KINTMPPFLD TELTAPSIHP GMLALDKRAR
210 220 230 240 250
WIPSLKSRPG KKHYIKIRVG APKMFTDKWY PQTDLCDMVL LTVYATAADM
260 270 280 290 300
QYPFGSPLTD SVVVNFQVLQ SMYDQNISIL PDQKSEREKL LTQITDYIPF
310 320 330 340 350
YNTTQTIAQL KPFIDAGNIT PNTPATTWGS YINTTKFTTA ATTTYTYPGT
360 370 380 390 400
TTTTVTMLTC NDSWYRGTVY NDKIKNLPKQ AATLYSKATK TLLGNTFTTD
410 420 430 440 450
DHTLEYHGGL YSSIWLSPGR SYFETTGAYT DIKYNPFTDR GEGNMLWIDW
460 470 480 490 500
LSKKNMNYDK VQSKCLISDL PLWAAAYGYV EFCAKSTGDQ NIHMNARLLI
510 520 530 540 550
RSPFTDPQLL VHTDPTKGFV PYSLNFGNGK MPGGSSNVPI RMRAKWYPTL
560 570 580 590 600
FHQQEVLEAL AQSGPFAYHS DIKKVSLGMK YRFKWIWGGN PVRQQVVRNP
610 620 630 640 650
CKETHSSGNR VPRSLQIVDP KYNSPELTFH TWDFRRGLFG PKAIQRMQQQ
660 670 680 690 700
PTTTDIFSAG HKRPRRDTEV YHSSQEGEQK ESLLFPPVKL LRRVPPWEDS
710 720 730 740 750
QQEESGSQSS EEETQTVSQQ LKQQLQQQRI LGVKLRLLFN QVQKIQQNQD
760 770
INPTLLPRGG DLASLFQIAP
Length:770
Mass (Da):90,165
Last modified:March 1, 2001 - v1
Checksum:i1BD91574BED7D602
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB041007 Genomic DNA Translation: BAB15944.1
AB041821 mRNA Translation: BAB15948.1

Similar proteinsi

Entry informationi

Entry nameiCAPSD_TTVV1
AccessioniPrimary (citable) accession number: Q9DHA8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: March 1, 2001
Last modified: September 27, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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