Q9DFY5 (Q9DFY5_RANCA) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 49.
History...
Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: RC-RNase6 ribonuclease EMBL AAG31442.2 |
| Organism | Rana catesbeiana (American bullfrog) (Lithobates catesbeiana) EMBL AAG31442.2 |
| Taxonomic identifier | 8400 [NCBI] |
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Amphibia › Batrachia › Anura › Neobatrachia › Ranoidea › Ranidae › Raninae › Rana › Aquarana |
Protein attributes
| Sequence length | 128 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
Ontologies
| Keywords | |
|---|---|
| Domain | Signal EMBL AAG31442.2 |
| Molecular function | Endonuclease SAAS SAAS023411 Hydrolase Nuclease |
| PTM | Disulfide bond SAAS SAAS023411 |
| Technical term | 3D-structure PDB 1OJ8 PDB 1OJ1 |
| Gene Ontology (GO) | |
| Molecular function | nucleic acid binding Inferred from electronic annotation. Source: InterPro pancreatic ribonuclease activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 23 | 23 | Potential EMBL AAG31442.2 | |||||
| Chain | 24 – 128 | 105 | RC-RNase6 ribonuclease EMBL AAG31442.2 | PRO_5000058114 | ||||
Sequences
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References
| [1] | "Purification and cloning of cytotoxic ribonucleases from Rana catesbeiana (bullfrog)." Liao Y.D., Huang H.C., Leu Y.J., Wei C.W., Tang P.C., Wang S.C. Nucleic Acids Res. 28:4097-4104(2000) [PubMed: 11058105] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Liver EMBL AAG31442.2. |
| [2] | Liao Y.-D., Huang H.-C., Leu Y.-J., Wei C.-W., Tang P.-C., Wang S.-C. Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Liver EMBL AAG31442.2. |
| [3] | "Retro and Novel Binding Modes in Cytotoxic Ribonucleases from Rana Catesbeiana of Two Crystal Structures Complexed with (2',5'Cpg) and D(Apcpgpa)." Tsai C.-J., Liu J.-H., Liao Y.-D., Chen L.-Y., Cheng P.-T., Sun Y.-J. Submitted (JUL-2003) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) OF 25-128. |
| [4] | "Nonproductive and Novel Binding Modes in Cytotoxic Ribonucleases from Rana Catesbeiana of Two Crystal Structures Complexed with C(2,5 Cpg) and D(Apcpgpa)." Tsai C.-J., Liu J.-H., Liao Y.-D., Chen L.-Y., Cheng P.-T., Sun Y.-J. Submitted (JUN-2003) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) OF 25-128. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF242556 Genomic DNA. Translation: AAG31442.2. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||
| ProteinModelPortal | Q9DFY5. | ||||||||||||||||||
| SMR | Q9DFY5. Positions 24-128. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| HOVERGEN | HBG008396. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| InterPro | IPR001427. RNaseA. IPR023411. RNaseA_AS. IPR023412. RNaseA_domain. [Graphical view] | ||||||||||||||||||
| Gene3D | G3DSA:3.10.130.10. RNaseA. 1 hit. | ||||||||||||||||||
| Pfam | PF00074. RnaseA. 1 hit. [Graphical view] | ||||||||||||||||||
| ProDom | PD000535. RNaseA. 1 hit. [Graphical view] [Entries sharing at least one domain] | ||||||||||||||||||
| SUPFAM | SSF54076. RNaseA. 1 hit. | ||||||||||||||||||
| PROSITE | PS00127. RNASE_PANCREATIC. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Entry information
| Entry name | Q9DFY5_RANCA | ||||||||
| Accession | Primary (citable) accession number: Q9DFY5 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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