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Protein
Submitted name:

Thyrotropin-releasing hormone receptor 1

Gene
N/A
Organism
Catostomus commersonii (White sucker) (Cyprinus commersonnii)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorUniRule annotation, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Submitted name:
Thyrotropin-releasing hormone receptor 1Imported
OrganismiCatostomus commersonii (White sucker) (Cyprinus commersonnii)Imported
Taxonomic identifieri7971 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCatostomidaeCatostomus

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei26 – 5126HelicalSequence analysisAdd
BLAST
Transmembranei63 – 8321HelicalSequence analysisAdd
BLAST
Transmembranei145 – 16319HelicalSequence analysisAdd
BLAST
Transmembranei197 – 21923HelicalSequence analysisAdd
BLAST
Transmembranei265 – 28622HelicalSequence analysisAdd
BLAST
Transmembranei298 – 32124HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ9DFB0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini42 – 318277G_PROTEIN_RECEP_F1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOVERGENiHBG007549.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR002120. TRH_rcpt_1.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00751. THYROLIBRINR.
PR01846. TRHRFAMILY.
SMARTiSM01381. 7TM_GPCR_Srsx. 1 hit.
[Graphical view]
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9DFB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENSTFFQLP NATLPTWTDN SIEYKFVSII LVILICGIGI VGNVMVILVV
60 70 80 90 100
LTTKHMRTPT NCYLVSLAVA DLMVLTAAGL PNITESLFGQ WVYGYAGCLS
110 120 130 140 150
ITYFQYLGIN ASSCSITAFT IERYIAICHP IKAQFLCTLS RAKKIIVVVW
160 170 180 190 200
VLTSLYCVMW FYLSDMEDLA YDNVILEKCA YKVSRNLYLP IYFTDFAVFY
210 220 230 240 250
VVPLLLATVL YGLIARILFL NPLPSDPKES RRNWKKDSSL GNKSINSRSS
260 270 280 290 300
SSCTTIASRR QVTKMLAVVV ILFALLWMPY RTLVVVNSFL KDAYLDTWFL
310 320 330 340 350
LFCRLCVYMN SAINPIIYNA MSQKFRAAFH KLCHCGAQRS EKPPTYSVAL
360 370 380 390 400
TYSVIKETSN GESPDHYSTE LDNIREAAEV LLPGRKMLSF KEPSLACKNT

LSTA
Length:404
Mass (Da):45,526
Last modified:March 1, 2001 - v1
Checksum:i42F70517902E02A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF288367 mRNA. Translation: AAG31763.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF288367 mRNA. Translation: AAG31763.1.

3D structure databases

ProteinModelPortaliQ9DFB0.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

GPCRDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG007549.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR002120. TRH_rcpt_1.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00751. THYROLIBRINR.
PR01846. TRHRFAMILY.
SMARTiSM01381. 7TM_GPCR_Srsx. 1 hit.
[Graphical view]
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9DFB0_CATCO
AccessioniPrimary (citable) accession number: Q9DFB0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: May 11, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.