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Q9DER6

- Q9DER6_CHICK

UniProt

Q9DER6 - Q9DER6_CHICK

Protein
Submitted name:

Coagulation factor XIIIA

Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (01 Mar 2001)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 calcium ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei322 – 3221UniRule annotation
    Active sitei381 – 3811UniRule annotation
    Active sitei404 – 4041UniRule annotation
    Metal bindingi444 – 4441CalciumUniRule annotation
    Metal bindingi446 – 4461CalciumUniRule annotation
    Metal bindingi493 – 4931CalciumUniRule annotation
    Metal bindingi498 – 4981CalciumUniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

    GO - Biological processi

    1. peptide cross-linking Source: InterPro

    Keywords - Ligandi

    CalciumUniRule annotation, Metal-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Coagulation factor XIIIAImported
    OrganismiGallus gallus (Chicken)Imported
    Taxonomic identifieri9031 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus

    Structurei

    3D structure databases

    ProteinModelPortaliQ9DER6.
    SMRiQ9DER6. Positions 18-734.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000231695.
    HOVERGENiHBG004342.
    InParanoidiQ9DER6.
    KOiK03917.
    PhylomeDBiQ9DER6.

    Family and domain databases

    Gene3Di2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view]
    PANTHERiPTHR11590. PTHR11590. 1 hit.
    PfamiPF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
    SMARTiSM00460. TGc. 1 hit.
    [Graphical view]
    SUPFAMiSSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9DER6-1 [UniParc]FASTAAdd to Basket

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    MSEPTSTDRE KKRPPLNGRR ALPSNNSNAE ENDVPEMDAF GLIPRGFNPK    50
    DYLRVVDIHM FKEPNEINKQ QHHTDKYYNP KLIVRRGQPF QIQIDFSRPY 100
    DPEKDQIWLE YLIGRYPQPN KGTYIPILIG DVLKPGEWGA KITHRENNSI 150
    RLSIMSSATC IIGKFRLYIA IWTPYGIIRT HRNSATDTYI LFNPWCQLDA 200
    VYLDDEKERE EYVLNDVGIV FHGDVNEVKL RSWSYGQFEE NILDACLFLM 250
    DKAELELSGR GNPIKICRVA SAMINSKDDN GVLAGSWDNL YDYGVPPSAW 300
    TGSVDILLEY YSSKQPVRYG QCWVFAGVFN TFLRCLGIPA RLITNYSSAH 350
    DNNANLQLDF FLDDEGQVDN RLTKDSVWNY HCWNEAWMTR PDLPVGFGGW 400
    QAVDGTPQET SDGMYRCGPA SVQAIKHGHV CFQFDAPFVY AEVNSDIIYS 450
    RMGKNGSQVI EKIDTTHIGK LIVTKGVGND DMVDITENYK FQEGSAEERL 500
    ALETAVMYGV KKQTTQPTTY QPQKDIEMDL QVQKVVLGSD FKVTIILRNK 550
    SRNSYTATTY LSGNIVFYTG VTKSEFKKHS FSAKLEPLLS NTFDVMITSA 600
    EYLNDLLDQA SFHFFVTARI NETGKVLAMQ KAVVLEIPTL KIKTKGQMVV 650
    DRETSVVVEF TNPLKQTLEN ATLRLEGPGV LRTMKKEFRQ IPAMSTLIWD 700
    VKCIPKRPGL RKLIASLNCD ALRHVYGELN IQVQKP 736
    Length:736
    Mass (Da):83,749
    Last modified:March 1, 2001 - v1
    Checksum:i100F69C0268C0331
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ278103 mRNA. Translation: CAC10657.1.
    RefSeqiNP_990016.1. NM_204685.1.
    UniGeneiGga.226.

    Genome annotation databases

    GeneIDi395420.
    KEGGigga:395420.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ278103 mRNA. Translation: CAC10657.1 .
    RefSeqi NP_990016.1. NM_204685.1.
    UniGenei Gga.226.

    3D structure databases

    ProteinModelPortali Q9DER6.
    SMRi Q9DER6. Positions 18-734.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 395420.
    KEGGi gga:395420.

    Organism-specific databases

    CTDi 2162.

    Phylogenomic databases

    HOGENOMi HOG000231695.
    HOVERGENi HBG004342.
    InParanoidi Q9DER6.
    KOi K03917.
    PhylomeDBi Q9DER6.

    Miscellaneous databases

    NextBioi 20815504.
    PROi Q9DER6.

    Family and domain databases

    Gene3Di 2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view ]
    PANTHERi PTHR11590. PTHR11590. 1 hit.
    Pfami PF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
    SMARTi SM00460. TGc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Chicken coagulation factor XIIIA is produced by the theca externa and stabilizes the ovarian follicular wall."
      Recheis B., Osanger A., Haubenwallner S., Schneider W.J., Nimpf J.
      J. Biol. Chem. 275:35320-35327(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: White LeghornImported.

    Entry informationi

    Entry nameiQ9DER6_CHICK
    AccessioniPrimary (citable) accession number: Q9DER6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2001
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)