Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q9DER6 (Q9DER6_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length736 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3221 By similarity PIRSR PIRSR000459-1
Active site3811 By similarity PIRSR PIRSR000459-1
Active site4041 By similarity PIRSR PIRSR000459-1
Metal binding4441Calcium By similarity
Metal binding4461Calcium By similarity
Metal binding4931Calcium By similarity
Metal binding4981Calcium By similarity

Sequences

Sequence LengthMass (Da)Tools
Q9DER6 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 100F69C0268C0331

FASTA73683,749
        10         20         30         40         50         60 
MSEPTSTDRE KKRPPLNGRR ALPSNNSNAE ENDVPEMDAF GLIPRGFNPK DYLRVVDIHM 

        70         80         90        100        110        120 
FKEPNEINKQ QHHTDKYYNP KLIVRRGQPF QIQIDFSRPY DPEKDQIWLE YLIGRYPQPN 

       130        140        150        160        170        180 
KGTYIPILIG DVLKPGEWGA KITHRENNSI RLSIMSSATC IIGKFRLYIA IWTPYGIIRT 

       190        200        210        220        230        240 
HRNSATDTYI LFNPWCQLDA VYLDDEKERE EYVLNDVGIV FHGDVNEVKL RSWSYGQFEE 

       250        260        270        280        290        300 
NILDACLFLM DKAELELSGR GNPIKICRVA SAMINSKDDN GVLAGSWDNL YDYGVPPSAW 

       310        320        330        340        350        360 
TGSVDILLEY YSSKQPVRYG QCWVFAGVFN TFLRCLGIPA RLITNYSSAH DNNANLQLDF 

       370        380        390        400        410        420 
FLDDEGQVDN RLTKDSVWNY HCWNEAWMTR PDLPVGFGGW QAVDGTPQET SDGMYRCGPA 

       430        440        450        460        470        480 
SVQAIKHGHV CFQFDAPFVY AEVNSDIIYS RMGKNGSQVI EKIDTTHIGK LIVTKGVGND 

       490        500        510        520        530        540 
DMVDITENYK FQEGSAEERL ALETAVMYGV KKQTTQPTTY QPQKDIEMDL QVQKVVLGSD 

       550        560        570        580        590        600 
FKVTIILRNK SRNSYTATTY LSGNIVFYTG VTKSEFKKHS FSAKLEPLLS NTFDVMITSA 

       610        620        630        640        650        660 
EYLNDLLDQA SFHFFVTARI NETGKVLAMQ KAVVLEIPTL KIKTKGQMVV DRETSVVVEF 

       670        680        690        700        710        720 
TNPLKQTLEN ATLRLEGPGV LRTMKKEFRQ IPAMSTLIWD VKCIPKRPGL RKLIASLNCD 

       730 
ALRHVYGELN IQVQKP 

« Hide

References

[1]"Chicken coagulation factor XIIIA is produced by the theca externa and stabilizes the ovarian follicular wall."
Recheis B., Osanger A., Haubenwallner S., Schneider W.J., Nimpf J.
J. Biol. Chem. 275:35320-35327(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: White Leghorn EMBL CAC10657.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ278103 mRNA. Translation: CAC10657.1.
RefSeqNP_990016.1. NM_204685.1.
UniGeneGga.226.

3D structure databases

ProteinModelPortalQ9DER6.
SMRQ9DER6. Positions 18-734.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID395420.
KEGGgga:395420.

Organism-specific databases

CTD2162.

Phylogenomic databases

HOGENOMHOG000231695.
HOVERGENHBG004342.
InParanoidQ9DER6.
KOK03917.
PhylomeDBQ9DER6.

Family and domain databases

Gene3D2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERPTHR11590. PTHR11590. 1 hit.
PfamPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFPIRSF000459. TGM_EBP42. 1 hit.
SMARTSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20815504.
PROQ9DER6.

Entry information

Entry nameQ9DER6_CHICK
AccessionPrimary (citable) accession number: Q9DER6
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: July 9, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)