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Q9DER6

- Q9DER6_CHICK

UniProt

Q9DER6 - Q9DER6_CHICK

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Protein
Submitted name: Coagulation factor XIIIA
Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

Cofactori

Binds 1 calcium ion per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei322 – 3221 By similarityUniRule annotation
Active sitei381 – 3811 By similarityUniRule annotation
Active sitei404 – 4041 By similarityUniRule annotation
Metal bindingi444 – 4441Calcium By similarity
Metal bindingi446 – 4461Calcium By similarity
Metal bindingi493 – 4931Calcium By similarity
Metal bindingi498 – 4981Calcium By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

GO - Biological processi

  1. peptide cross-linking Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Coagulation factor XIIIAImported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus

Structurei

3D structure databases

ProteinModelPortaliQ9DER6.
SMRiQ9DER6. Positions 18-734.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000231695.
HOVERGENiHBG004342.
InParanoidiQ9DER6.
KOiK03917.
PhylomeDBiQ9DER6.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9DER6-1 [UniParc]FASTAAdd to Basket

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MSEPTSTDRE KKRPPLNGRR ALPSNNSNAE ENDVPEMDAF GLIPRGFNPK    50
DYLRVVDIHM FKEPNEINKQ QHHTDKYYNP KLIVRRGQPF QIQIDFSRPY 100
DPEKDQIWLE YLIGRYPQPN KGTYIPILIG DVLKPGEWGA KITHRENNSI 150
RLSIMSSATC IIGKFRLYIA IWTPYGIIRT HRNSATDTYI LFNPWCQLDA 200
VYLDDEKERE EYVLNDVGIV FHGDVNEVKL RSWSYGQFEE NILDACLFLM 250
DKAELELSGR GNPIKICRVA SAMINSKDDN GVLAGSWDNL YDYGVPPSAW 300
TGSVDILLEY YSSKQPVRYG QCWVFAGVFN TFLRCLGIPA RLITNYSSAH 350
DNNANLQLDF FLDDEGQVDN RLTKDSVWNY HCWNEAWMTR PDLPVGFGGW 400
QAVDGTPQET SDGMYRCGPA SVQAIKHGHV CFQFDAPFVY AEVNSDIIYS 450
RMGKNGSQVI EKIDTTHIGK LIVTKGVGND DMVDITENYK FQEGSAEERL 500
ALETAVMYGV KKQTTQPTTY QPQKDIEMDL QVQKVVLGSD FKVTIILRNK 550
SRNSYTATTY LSGNIVFYTG VTKSEFKKHS FSAKLEPLLS NTFDVMITSA 600
EYLNDLLDQA SFHFFVTARI NETGKVLAMQ KAVVLEIPTL KIKTKGQMVV 650
DRETSVVVEF TNPLKQTLEN ATLRLEGPGV LRTMKKEFRQ IPAMSTLIWD 700
VKCIPKRPGL RKLIASLNCD ALRHVYGELN IQVQKP 736
Length:736
Mass (Da):83,749
Last modified:March 1, 2001 - v1
Checksum:i100F69C0268C0331
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ278103 mRNA. Translation: CAC10657.1.
RefSeqiNP_990016.1. NM_204685.1.
UniGeneiGga.226.

Genome annotation databases

GeneIDi395420.
KEGGigga:395420.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ278103 mRNA. Translation: CAC10657.1 .
RefSeqi NP_990016.1. NM_204685.1.
UniGenei Gga.226.

3D structure databases

ProteinModelPortali Q9DER6.
SMRi Q9DER6. Positions 18-734.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 395420.
KEGGi gga:395420.

Organism-specific databases

CTDi 2162.

Phylogenomic databases

HOGENOMi HOG000231695.
HOVERGENi HBG004342.
InParanoidi Q9DER6.
KOi K03917.
PhylomeDBi Q9DER6.

Miscellaneous databases

NextBioi 20815504.
PROi Q9DER6.

Family and domain databases

Gene3Di 2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view ]
PANTHERi PTHR11590. PTHR11590. 1 hit.
Pfami PF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
SMARTi SM00460. TGc. 1 hit.
[Graphical view ]
SUPFAMi SSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Chicken coagulation factor XIIIA is produced by the theca externa and stabilizes the ovarian follicular wall."
    Recheis B., Osanger A., Haubenwallner S., Schneider W.J., Nimpf J.
    J. Biol. Chem. 275:35320-35327(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: White LeghornImported.

Entry informationi

Entry nameiQ9DER6_CHICK
AccessioniPrimary (citable) accession number: Q9DER6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: July 9, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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