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Protein

Cytochrome c oxidase subunit 6A, mitochondrial

Gene

Cox6a1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Cytochrome c oxidase subunit 6A, mitochondrialUniRule annotation
Alternative name(s):
Cytochrome c oxidase polypeptide VIaUniRule annotation
Gene namesi
Name:Cox6a1Imported
ORF Names:mCG_19235Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 5

Organism-specific databases

MGIiMGI:103099. Cox6a1.

Subcellular locationi

  • Mitochondrion inner membrane UniRule annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei43 – 6220HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membraneUniRule annotation

Expressioni

Gene expression databases

BgeeiENSMUSG00000041697.

Interactioni

Protein-protein interaction databases

MINTiMINT-4128746.
STRINGi10090.ENSMUSP00000047661.

Family & Domainsi

Sequence similaritiesi

Belongs to the cytochrome c oxidase subunit 6A family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3469. Eukaryota.
ENOG411253X. LUCA.
GeneTreeiENSGT00390000002756.
HOGENOMiHOG000193965.
HOVERGENiHBG060482.
KOiK02266.
OMAiGYEGHDE.
OrthoDBiEOG091G0C5F.
TreeFamiTF105064.

Family and domain databases

Gene3Di4.10.95.10. 1 hit.
InterProiIPR001349. Cyt_c_oxidase_su6a.
IPR018507. Cyt_c_oxidase_su6a_CS.
[Graphical view]
PANTHERiPTHR11504. PTHR11504. 1 hit.
PfamiPF02046. COX6A. 1 hit.
[Graphical view]
PIRSFiPIRSF000277. COX6A1. 1 hit.
ProDomiPD006036. Cyt_c_oxidase_su6a. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF81411. SSF81411. 1 hit.
PROSITEiPS01329. COX6A. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9DCW5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMASAVLSAS RVSRPLGRAL PGLRRPMSSG AHGEEGSARM WKALTYFVAL
60 70 80 90 100
PGVGVSMLNV FLKSRHEEHE RPPFVAYPHL RIRTKPFPWG DGNHTLFHNP
110
HVNPLPTGYE DE
Length:112
Mass (Da):12,483
Last modified:June 1, 2001 - v1
Checksum:iB23E80132C8A578D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC117735 Genomic DNA. No translation available.
BC003807 mRNA. Translation: AAH03807.1.
BC052816 mRNA. Translation: AAH52816.1.
AK002402 mRNA. Translation: BAB22073.1.
AK019318 mRNA. Translation: BAB31662.2.
AK166496 mRNA. Translation: BAE38808.1.
CH466529 Genomic DNA. Translation: EDL19862.1.
PIRiS52088.
RefSeqiNP_031774.1. NM_007748.3.
UniGeneiMm.43415.

Genome annotation databases

EnsembliENSMUST00000040154; ENSMUSP00000047661; ENSMUSG00000041697.
GeneIDi12861.
KEGGimmu:12861.
UCSCiuc008zdt.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC117735 Genomic DNA. No translation available.
BC003807 mRNA. Translation: AAH03807.1.
BC052816 mRNA. Translation: AAH52816.1.
AK002402 mRNA. Translation: BAB22073.1.
AK019318 mRNA. Translation: BAB31662.2.
AK166496 mRNA. Translation: BAE38808.1.
CH466529 Genomic DNA. Translation: EDL19862.1.
PIRiS52088.
RefSeqiNP_031774.1. NM_007748.3.
UniGeneiMm.43415.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4128746.
STRINGi10090.ENSMUSP00000047661.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000040154; ENSMUSP00000047661; ENSMUSG00000041697.
GeneIDi12861.
KEGGimmu:12861.
UCSCiuc008zdt.1. mouse.

Organism-specific databases

CTDi1337.
MGIiMGI:103099. Cox6a1.

Phylogenomic databases

eggNOGiKOG3469. Eukaryota.
ENOG411253X. LUCA.
GeneTreeiENSGT00390000002756.
HOGENOMiHOG000193965.
HOVERGENiHBG060482.
KOiK02266.
OMAiGYEGHDE.
OrthoDBiEOG091G0C5F.
TreeFamiTF105064.

Miscellaneous databases

ChiTaRSiCox6a1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000041697.

Family and domain databases

Gene3Di4.10.95.10. 1 hit.
InterProiIPR001349. Cyt_c_oxidase_su6a.
IPR018507. Cyt_c_oxidase_su6a_CS.
[Graphical view]
PANTHERiPTHR11504. PTHR11504. 1 hit.
PfamiPF02046. COX6A. 1 hit.
[Graphical view]
PIRSFiPIRSF000277. COX6A1. 1 hit.
ProDomiPD006036. Cyt_c_oxidase_su6a. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF81411. SSF81411. 1 hit.
PROSITEiPS01329. COX6A. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9DCW5_MOUSE
AccessioniPrimary (citable) accession number: Q9DCW5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 7, 2016
This is version 118 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.