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Q9DC42

- Q9DC42_MOUSE

UniProt

Q9DC42 - Q9DC42_MOUSE

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Protein
Submitted name:

CD97 antigen

Gene
Cd97
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. G-protein coupled receptor activity Source: InterPro
  3. transmembrane signaling receptor activity Source: MGI

GO - Biological processi

  1. neuropeptide signaling pathway Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
CD97 antigenImported
Gene namesi
Name:Cd97Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 8

Organism-specific databases

MGIiMGI:1347095. Cd97.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: MGI
  2. plasma membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membraneSAAS annotations, Membrane

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotations

Expressioni

Gene expression databases

GenevestigatoriQ9DC42.

Family & Domainsi

Sequence similaritiesi

Contains GPS domain.SAAS annotations

Keywords - Domaini

EGF-like domainUniRule annotationSAAS annotations, Transmembrane, Transmembrane helixSAAS annotations

Phylogenomic databases

GeneTreeiENSGT00710000106562.
HOVERGENiHBG048917.
KOiK08446.

Family and domain databases

InterProiIPR000742. EG-like_dom.
IPR001881. EGF-like_Ca-bd_dom.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR017981. GPCR_2-like.
IPR003056. GPCR_2_CD97.
IPR000832. GPCR_2_secretin-like.
IPR000203. GPS.
[Graphical view]
PfamiPF00002. 7tm_2. 1 hit.
PF07645. EGF_CA. 2 hits.
PF01825. GPS. 1 hit.
[Graphical view]
PRINTSiPR01278. CD97PROTEIN.
PR00249. GPCRSECRETIN.
SMARTiSM00181. EGF. 1 hit.
SM00179. EGF_CA. 2 hits.
SM00303. GPS. 1 hit.
[Graphical view]
PROSITEiPS00010. ASX_HYDROXYL. 2 hits.
PS50026. EGF_3. 2 hits.
PS01187. EGF_CA. 2 hits.
PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
PS50221. GPS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9DC42-1 [UniParc]FASTAAdd to Basket

« Hide

MRGVRCPGLL VVCILLSLSG AGTQKAENCA KWCPINSKCV SNRSCVCKPG    50
FSSEKELITN PAESCEDINE CLLPGFSCGD FAMCKNSEGS YTCVCNLGYK 100
LLSGAESFVN ESENTCQDVD ECSSGQHQCH NSTVCKNTVG SYKCHCRPGW 150
KPTSGSLRGP DTICQEPPFP TWTLLPTAHS QTLLRFSVEV QNLLRDFNPA 200
TVNYTIQKLI EAVDKLLEDP METETQQVAA QLLSNLEQSL RTLAQFLPKG 250
PFTYTSPSNT ELSLMVKEQD NKDVTTVHHG QTWMELDWAV TAGAKISENG 300
SSVAGILSSP NMEKLLGNTP LNLEQRRASL EDFYGSPIPS VSLKLLSNIN 350
SVFLTNTNTE KLASNVTFKF DFTSVESIEP RHELICAFWK AHNGNGYWDT 400
DGCSMNGTGF CHCNHLTSFA ILMAQYHVQD PRLELITKVG LLLSLICLLL 450
CILTFLLVKP IQSSRTMVHL HLCICLFLGS IIFLVGVENE GGEVGLRCRL 500
VAVMLHFCFL AAFCWMALEG VELYFLVVRV FQGQGLSTWQ RCLIGYGVPL 550
LIVAISMAVV KMDGYGHATY CWLDFRKQGF LWSFSGPVAF IIFCNAAIFV 600
ITVWKLTKKF SEINPNMKKL RKARVLTITS IAQLLVLGCT WGFGLFLFNP 650
HSTWLSYIFT LLNCLQGLFL YVMLCLLNKK VREEYWKWAC MVTGSKYTEF 700
NSSTTGTGTS QTRALRSSES GM 722
Length:722
Mass (Da):80,203
Last modified:June 1, 2001 - v1
Checksum:iD944563020DE3326
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC164432 Genomic DNA. No translation available.
AK004577 mRNA. Translation: BAB23386.1.
RefSeqiNP_001156501.1. NM_001163029.1.
NP_001156502.1. NM_001163030.1.
NP_001156503.1. NM_001163031.1.
NP_036055.2. NM_011925.2.
UniGeneiMm.334648.

Genome annotation databases

EnsembliENSMUST00000166939; ENSMUSP00000128220; ENSMUSG00000002885.
GeneIDi26364.
KEGGimmu:26364.
UCSCiuc009mle.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC164432 Genomic DNA. No translation available.
AK004577 mRNA. Translation: BAB23386.1 .
RefSeqi NP_001156501.1. NM_001163029.1.
NP_001156502.1. NM_001163030.1.
NP_001156503.1. NM_001163031.1.
NP_036055.2. NM_011925.2.
UniGenei Mm.334648.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000166939 ; ENSMUSP00000128220 ; ENSMUSG00000002885 .
GeneIDi 26364.
KEGGi mmu:26364.
UCSCi uc009mle.2. mouse.

Organism-specific databases

CTDi 976.
MGIi MGI:1347095. Cd97.

Phylogenomic databases

GeneTreei ENSGT00710000106562.
HOVERGENi HBG048917.
KOi K08446.

Miscellaneous databases

ChiTaRSi CD97. mouse.
NextBioi 304231.
SOURCEi Search...

Gene expression databases

Genevestigatori Q9DC42.

Family and domain databases

InterProi IPR000742. EG-like_dom.
IPR001881. EGF-like_Ca-bd_dom.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR017981. GPCR_2-like.
IPR003056. GPCR_2_CD97.
IPR000832. GPCR_2_secretin-like.
IPR000203. GPS.
[Graphical view ]
Pfami PF00002. 7tm_2. 1 hit.
PF07645. EGF_CA. 2 hits.
PF01825. GPS. 1 hit.
[Graphical view ]
PRINTSi PR01278. CD97PROTEIN.
PR00249. GPCRSECRETIN.
SMARTi SM00181. EGF. 1 hit.
SM00179. EGF_CA. 2 hits.
SM00303. GPS. 1 hit.
[Graphical view ]
PROSITEi PS00010. ASX_HYDROXYL. 2 hits.
PS50026. EGF_3. 2 hits.
PS01187. EGF_CA. 2 hits.
PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
PS50221. GPS. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  5. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  10. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ9DC42_MOUSE
AccessioniPrimary (citable) accession number: Q9DC42
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: February 19, 2014
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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