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Q9DC42

- Q9DC42_MOUSE

UniProt

Q9DC42 - Q9DC42_MOUSE

Protein
Submitted name:

CD97 antigen

Gene

Cd97

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 96 (01 Oct 2014)
      Sequence version 1 (01 Jun 2001)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. G-protein coupled receptor activity Source: InterPro
    3. transmembrane signaling receptor activity Source: MGI

    GO - Biological processi

    1. neuropeptide signaling pathway Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    CD97 antigenImported
    Gene namesi
    Name:Cd97Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 8

    Organism-specific databases

    MGIiMGI:1347095. Cd97.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: MGI
    2. plasma membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell membraneSAAS annotation, Membrane

    PTM / Processingi

    Keywords - PTMi

    Disulfide bondSAAS annotation

    Expressioni

    Gene expression databases

    GenevestigatoriQ9DC42.

    Family & Domainsi

    Sequence similaritiesi

    Contains GPS domain.SAAS annotation

    Keywords - Domaini

    EGF-like domainUniRule annotationSAAS annotation, Transmembrane, Transmembrane helixSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00710000106562.
    HOVERGENiHBG048917.
    KOiK08446.

    Family and domain databases

    InterProiIPR000742. EG-like_dom.
    IPR001881. EGF-like_Ca-bd_dom.
    IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
    IPR018097. EGF_Ca-bd_CS.
    IPR017981. GPCR_2-like.
    IPR003056. GPCR_2_CD97.
    IPR000832. GPCR_2_secretin-like.
    IPR000203. GPS.
    [Graphical view]
    PfamiPF00002. 7tm_2. 1 hit.
    PF07645. EGF_CA. 2 hits.
    PF01825. GPS. 1 hit.
    [Graphical view]
    PRINTSiPR01278. CD97PROTEIN.
    PR00249. GPCRSECRETIN.
    SMARTiSM00181. EGF. 1 hit.
    SM00179. EGF_CA. 2 hits.
    SM00303. GPS. 1 hit.
    [Graphical view]
    PROSITEiPS00010. ASX_HYDROXYL. 2 hits.
    PS50026. EGF_3. 2 hits.
    PS01187. EGF_CA. 2 hits.
    PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
    PS50221. GPS. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9DC42-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRGVRCPGLL VVCILLSLSG AGTQKAENCA KWCPINSKCV SNRSCVCKPG    50
    FSSEKELITN PAESCEDINE CLLPGFSCGD FAMCKNSEGS YTCVCNLGYK 100
    LLSGAESFVN ESENTCQDVD ECSSGQHQCH NSTVCKNTVG SYKCHCRPGW 150
    KPTSGSLRGP DTICQEPPFP TWTLLPTAHS QTLLRFSVEV QNLLRDFNPA 200
    TVNYTIQKLI EAVDKLLEDP METETQQVAA QLLSNLEQSL RTLAQFLPKG 250
    PFTYTSPSNT ELSLMVKEQD NKDVTTVHHG QTWMELDWAV TAGAKISENG 300
    SSVAGILSSP NMEKLLGNTP LNLEQRRASL EDFYGSPIPS VSLKLLSNIN 350
    SVFLTNTNTE KLASNVTFKF DFTSVESIEP RHELICAFWK AHNGNGYWDT 400
    DGCSMNGTGF CHCNHLTSFA ILMAQYHVQD PRLELITKVG LLLSLICLLL 450
    CILTFLLVKP IQSSRTMVHL HLCICLFLGS IIFLVGVENE GGEVGLRCRL 500
    VAVMLHFCFL AAFCWMALEG VELYFLVVRV FQGQGLSTWQ RCLIGYGVPL 550
    LIVAISMAVV KMDGYGHATY CWLDFRKQGF LWSFSGPVAF IIFCNAAIFV 600
    ITVWKLTKKF SEINPNMKKL RKARVLTITS IAQLLVLGCT WGFGLFLFNP 650
    HSTWLSYIFT LLNCLQGLFL YVMLCLLNKK VREEYWKWAC MVTGSKYTEF 700
    NSSTTGTGTS QTRALRSSES GM 722
    Length:722
    Mass (Da):80,203
    Last modified:June 1, 2001 - v1
    Checksum:iD944563020DE3326
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC164432 Genomic DNA. No translation available.
    AK004577 mRNA. Translation: BAB23386.1.
    RefSeqiNP_001156501.1. NM_001163029.1.
    NP_001156502.1. NM_001163030.1.
    NP_001156503.1. NM_001163031.1.
    NP_036055.2. NM_011925.2.
    UniGeneiMm.334648.

    Genome annotation databases

    EnsembliENSMUST00000166939; ENSMUSP00000128220; ENSMUSG00000002885.
    GeneIDi26364.
    KEGGimmu:26364.
    UCSCiuc009mle.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC164432 Genomic DNA. No translation available.
    AK004577 mRNA. Translation: BAB23386.1 .
    RefSeqi NP_001156501.1. NM_001163029.1.
    NP_001156502.1. NM_001163030.1.
    NP_001156503.1. NM_001163031.1.
    NP_036055.2. NM_011925.2.
    UniGenei Mm.334648.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000166939 ; ENSMUSP00000128220 ; ENSMUSG00000002885 .
    GeneIDi 26364.
    KEGGi mmu:26364.
    UCSCi uc009mle.2. mouse.

    Organism-specific databases

    CTDi 976.
    MGIi MGI:1347095. Cd97.

    Phylogenomic databases

    GeneTreei ENSGT00710000106562.
    HOVERGENi HBG048917.
    KOi K08446.

    Miscellaneous databases

    ChiTaRSi CD97. mouse.
    NextBioi 304231.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q9DC42.

    Family and domain databases

    InterProi IPR000742. EG-like_dom.
    IPR001881. EGF-like_Ca-bd_dom.
    IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
    IPR018097. EGF_Ca-bd_CS.
    IPR017981. GPCR_2-like.
    IPR003056. GPCR_2_CD97.
    IPR000832. GPCR_2_secretin-like.
    IPR000203. GPS.
    [Graphical view ]
    Pfami PF00002. 7tm_2. 1 hit.
    PF07645. EGF_CA. 2 hits.
    PF01825. GPS. 1 hit.
    [Graphical view ]
    PRINTSi PR01278. CD97PROTEIN.
    PR00249. GPCRSECRETIN.
    SMARTi SM00181. EGF. 1 hit.
    SM00179. EGF_CA. 2 hits.
    SM00303. GPS. 1 hit.
    [Graphical view ]
    PROSITEi PS00010. ASX_HYDROXYL. 2 hits.
    PS50026. EGF_3. 2 hits.
    PS01187. EGF_CA. 2 hits.
    PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
    PS50221. GPS. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: LungImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: LungImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: LungImported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: LungImported.
    5. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: LungImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: LungImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: LungImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: LungImported.
    9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    10. Ensembl
      Submitted (JUN-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ9DC42_MOUSE
    AccessioniPrimary (citable) accession number: Q9DC42
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2001
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 96 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3