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Q9DC42

- Q9DC42_MOUSE

UniProt

Q9DC42 - Q9DC42_MOUSE

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Protein
Submitted name:

CD97 antigen

Gene

Cd97

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. G-protein coupled receptor activity Source: InterPro
  3. transmembrane signaling receptor activity Source: MGI

GO - Biological processi

  1. neuropeptide signaling pathway Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
CD97 antigenImported
Gene namesi
Name:Cd97Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 8

Organism-specific databases

MGIiMGI:1347095. Cd97.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: MGI
  2. plasma membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membraneSAAS annotation, Membrane

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Expressioni

Gene expression databases

GenevestigatoriQ9DC42.

Family & Domainsi

Sequence similaritiesi

Contains GPS domain.SAAS annotation

Keywords - Domaini

EGF-like domainUniRule annotationSAAS annotation, Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118787.
HOVERGENiHBG048917.
KOiK08446.

Family and domain databases

InterProiIPR000742. EG-like_dom.
IPR001881. EGF-like_Ca-bd_dom.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR017981. GPCR_2-like.
IPR003056. GPCR_2_CD97.
IPR000832. GPCR_2_secretin-like.
IPR000203. GPS.
[Graphical view]
PfamiPF00002. 7tm_2. 1 hit.
PF07645. EGF_CA. 2 hits.
PF01825. GPS. 1 hit.
[Graphical view]
PRINTSiPR01278. CD97PROTEIN.
PR00249. GPCRSECRETIN.
SMARTiSM00181. EGF. 1 hit.
SM00179. EGF_CA. 2 hits.
SM00303. GPS. 1 hit.
[Graphical view]
PROSITEiPS00010. ASX_HYDROXYL. 2 hits.
PS50026. EGF_3. 2 hits.
PS01187. EGF_CA. 2 hits.
PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
PS50221. GPS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9DC42-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRGVRCPGLL VVCILLSLSG AGTQKAENCA KWCPINSKCV SNRSCVCKPG
60 70 80 90 100
FSSEKELITN PAESCEDINE CLLPGFSCGD FAMCKNSEGS YTCVCNLGYK
110 120 130 140 150
LLSGAESFVN ESENTCQDVD ECSSGQHQCH NSTVCKNTVG SYKCHCRPGW
160 170 180 190 200
KPTSGSLRGP DTICQEPPFP TWTLLPTAHS QTLLRFSVEV QNLLRDFNPA
210 220 230 240 250
TVNYTIQKLI EAVDKLLEDP METETQQVAA QLLSNLEQSL RTLAQFLPKG
260 270 280 290 300
PFTYTSPSNT ELSLMVKEQD NKDVTTVHHG QTWMELDWAV TAGAKISENG
310 320 330 340 350
SSVAGILSSP NMEKLLGNTP LNLEQRRASL EDFYGSPIPS VSLKLLSNIN
360 370 380 390 400
SVFLTNTNTE KLASNVTFKF DFTSVESIEP RHELICAFWK AHNGNGYWDT
410 420 430 440 450
DGCSMNGTGF CHCNHLTSFA ILMAQYHVQD PRLELITKVG LLLSLICLLL
460 470 480 490 500
CILTFLLVKP IQSSRTMVHL HLCICLFLGS IIFLVGVENE GGEVGLRCRL
510 520 530 540 550
VAVMLHFCFL AAFCWMALEG VELYFLVVRV FQGQGLSTWQ RCLIGYGVPL
560 570 580 590 600
LIVAISMAVV KMDGYGHATY CWLDFRKQGF LWSFSGPVAF IIFCNAAIFV
610 620 630 640 650
ITVWKLTKKF SEINPNMKKL RKARVLTITS IAQLLVLGCT WGFGLFLFNP
660 670 680 690 700
HSTWLSYIFT LLNCLQGLFL YVMLCLLNKK VREEYWKWAC MVTGSKYTEF
710 720
NSSTTGTGTS QTRALRSSES GM
Length:722
Mass (Da):80,203
Last modified:June 1, 2001 - v1
Checksum:iD944563020DE3326
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC164432 Genomic DNA. No translation available.
AK004577 mRNA. Translation: BAB23386.1.
RefSeqiNP_001156501.1. NM_001163029.1.
NP_001156502.1. NM_001163030.1.
NP_001156503.1. NM_001163031.1.
NP_036055.2. NM_011925.2.
UniGeneiMm.334648.

Genome annotation databases

EnsembliENSMUST00000166939; ENSMUSP00000128220; ENSMUSG00000002885.
GeneIDi26364.
KEGGimmu:26364.
UCSCiuc009mle.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC164432 Genomic DNA. No translation available.
AK004577 mRNA. Translation: BAB23386.1 .
RefSeqi NP_001156501.1. NM_001163029.1.
NP_001156502.1. NM_001163030.1.
NP_001156503.1. NM_001163031.1.
NP_036055.2. NM_011925.2.
UniGenei Mm.334648.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000166939 ; ENSMUSP00000128220 ; ENSMUSG00000002885 .
GeneIDi 26364.
KEGGi mmu:26364.
UCSCi uc009mle.2. mouse.

Organism-specific databases

CTDi 976.
MGIi MGI:1347095. Cd97.

Phylogenomic databases

GeneTreei ENSGT00760000118787.
HOVERGENi HBG048917.
KOi K08446.

Miscellaneous databases

ChiTaRSi Cd97. mouse.
NextBioi 304231.
SOURCEi Search...

Gene expression databases

Genevestigatori Q9DC42.

Family and domain databases

InterProi IPR000742. EG-like_dom.
IPR001881. EGF-like_Ca-bd_dom.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR017981. GPCR_2-like.
IPR003056. GPCR_2_CD97.
IPR000832. GPCR_2_secretin-like.
IPR000203. GPS.
[Graphical view ]
Pfami PF00002. 7tm_2. 1 hit.
PF07645. EGF_CA. 2 hits.
PF01825. GPS. 1 hit.
[Graphical view ]
PRINTSi PR01278. CD97PROTEIN.
PR00249. GPCRSECRETIN.
SMARTi SM00181. EGF. 1 hit.
SM00179. EGF_CA. 2 hits.
SM00303. GPS. 1 hit.
[Graphical view ]
PROSITEi PS00010. ASX_HYDROXYL. 2 hits.
PS50026. EGF_3. 2 hits.
PS01187. EGF_CA. 2 hits.
PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
PS50221. GPS. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  5. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: LungImported.
  9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  10. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ9DC42_MOUSE
AccessioniPrimary (citable) accession number: Q9DC42
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: November 26, 2014
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3