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Q9DBW3

- NATD1_MOUSE

UniProt

Q9DBW3 - NATD1_MOUSE

Protein

Protein NATD1

Gene

Natd1

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein NATD1
    Alternative name(s):
    Gene trap locus protein F3-2
    Gene trap locus protein F3b
    N-acetyltransferase domain-containing protein 1
    Gene namesi
    Name:Natd1
    Synonyms:Gm16515, Gtlf3b
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 11

    Organism-specific databases

    MGIiMGI:1344388. Natd1.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 110110Protein NATD1PRO_0000320657Add
    BLAST

    Proteomic databases

    PaxDbiQ9DBW3.
    PRIDEiQ9DBW3.

    2D gel databases

    REPRODUCTION-2DPAGEQ9DBW3.

    PTM databases

    PhosphoSiteiQ9DBW3.

    Expressioni

    Tissue specificityi

    Expressed in the heart, testis, kidney and lung.1 Publication

    Developmental stagei

    Detected at multiple sites in embryonic day 10.5 embryos, including the genital ridges, the aortic endothelium and endothelium-associated cell clusters within the aortic lumen.1 Publication

    Gene expression databases

    BgeeiQ9DBW3.
    CleanExiMM_GTLF3B.
    GenevestigatoriQ9DBW3.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000019075.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9DBW3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the NATD1 family.Curated

    Phylogenomic databases

    eggNOGiNOG68119.
    GeneTreeiENSGT00390000014840.
    HOGENOMiHOG000167985.
    HOVERGENiHBG055172.
    InParanoidiQ9DBW3.
    KOiK06975.
    OMAiCPIRVEH.
    OrthoDBiEOG72ZCGQ.
    PhylomeDBiQ9DBW3.
    TreeFamiTF314063.

    Family and domain databases

    Gene3Di3.40.630.30. 1 hit.
    InterProiIPR016181. Acyl_CoA_acyltransferase.
    [Graphical view]
    SUPFAMiSSF55729. SSF55729. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9DBW3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAHATPPSAL EQGGPIRVEH DRQRRQFSVR LNGCHDRAVL LYEYVGKRIV    50
    DLQHTEVPDA YRGRGIAKHL AKAALDFVVE EDLKAHLTCW YIQKYVKENP 100
    LPQYLERLQP 110
    Length:110
    Mass (Da):12,731
    Last modified:June 1, 2001 - v1
    Checksum:iA98C9C2B503D149A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK004720 mRNA. Translation: BAB23503.1.
    AK080453 mRNA. Translation: BAC37922.1.
    AK089179 mRNA. Translation: BAC40780.1.
    AL603830 Genomic DNA. Translation: CAI25795.1.
    BC034332 mRNA. Translation: AAH34332.1.
    BC038816 mRNA. Translation: AAH38816.1.
    CCDSiCCDS24802.1.
    RefSeqiNP_079570.1. NM_025294.5.
    UniGeneiMm.22780.

    Genome annotation databases

    EnsembliENSMUST00000019075; ENSMUSP00000019075; ENSMUSG00000018931.
    GeneIDi24083.
    KEGGimmu:24083.
    UCSCiuc007jgu.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK004720 mRNA. Translation: BAB23503.1 .
    AK080453 mRNA. Translation: BAC37922.1 .
    AK089179 mRNA. Translation: BAC40780.1 .
    AL603830 Genomic DNA. Translation: CAI25795.1 .
    BC034332 mRNA. Translation: AAH34332.1 .
    BC038816 mRNA. Translation: AAH38816.1 .
    CCDSi CCDS24802.1.
    RefSeqi NP_079570.1. NM_025294.5.
    UniGenei Mm.22780.

    3D structure databases

    ProteinModelPortali Q9DBW3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000019075.

    PTM databases

    PhosphoSitei Q9DBW3.

    2D gel databases

    REPRODUCTION-2DPAGE Q9DBW3.

    Proteomic databases

    PaxDbi Q9DBW3.
    PRIDEi Q9DBW3.

    Protocols and materials databases

    DNASUi 24083.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000019075 ; ENSMUSP00000019075 ; ENSMUSG00000018931 .
    GeneIDi 24083.
    KEGGi mmu:24083.
    UCSCi uc007jgu.2. mouse.

    Organism-specific databases

    CTDi 256302.
    MGIi MGI:1344388. Natd1.

    Phylogenomic databases

    eggNOGi NOG68119.
    GeneTreei ENSGT00390000014840.
    HOGENOMi HOG000167985.
    HOVERGENi HBG055172.
    InParanoidi Q9DBW3.
    KOi K06975.
    OMAi CPIRVEH.
    OrthoDBi EOG72ZCGQ.
    PhylomeDBi Q9DBW3.
    TreeFami TF314063.

    Miscellaneous databases

    NextBioi 304085.
    PROi Q9DBW3.
    SOURCEi Search...

    Gene expression databases

    Bgeei Q9DBW3.
    CleanExi MM_GTLF3B.
    Genevestigatori Q9DBW3.

    Family and domain databases

    Gene3Di 3.40.630.30. 1 hit.
    InterProi IPR016181. Acyl_CoA_acyltransferase.
    [Graphical view ]
    SUPFAMi SSF55729. SSF55729. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J and NOD.
      Tissue: Cerebellum and Lung.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6J.
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Mammary tumor.
    4. "Gene trap screening using negative selection: identification of two tandem, differentially expressed loci with potential hematopoietic function."
      Cannon J.P., Colicos S.M., Belmont J.W.
      Dev. Genet. 25:49-63(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.

    Entry informationi

    Entry nameiNATD1_MOUSE
    AccessioniPrimary (citable) accession number: Q9DBW3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 26, 2008
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 91 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3