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Q9DAU5

- Q9DAU5_MOUSE

UniProt

Q9DAU5 - Q9DAU5_MOUSE

Protein
Submitted name:

Protein delta homolog 1

Gene

Dlk1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 92 (01 Oct 2014)
      Sequence version 1 (01 Jun 2001)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro

    GO - Biological processi

    1. embryonic skeletal system development Source: MGI
    2. negative regulation of Notch signaling pathway Source: MGI
    3. post-embryonic development Source: MGI
    4. regulation of gene expression Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein delta homolog 1Imported
    Gene namesi
    Name:Dlk1Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 12

    Organism-specific databases

    MGIiMGI:94900. Dlk1.

    Subcellular locationi

    GO - Cellular componenti

    1. external side of plasma membrane Source: MGI

    PTM / Processingi

    Keywords - PTMi

    Disulfide bondSAAS annotation

    Expressioni

    Gene expression databases

    GenevestigatoriQ9DAU5.

    Family & Domainsi

    Keywords - Domaini

    EGF-like domainUniRule annotationSAAS annotation, RepeatSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00750000117426.
    HOGENOMiHOG000072581.
    HOVERGENiHBG007065.

    Family and domain databases

    InterProiIPR000742. EG-like_dom.
    IPR001881. EGF-like_Ca-bd_dom.
    IPR013032. EGF-like_CS.
    IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
    [Graphical view]
    PfamiPF00008. EGF. 3 hits.
    [Graphical view]
    SMARTiSM00181. EGF. 4 hits.
    SM00179. EGF_CA. 1 hit.
    [Graphical view]
    PROSITEiPS00010. ASX_HYDROXYL. 1 hit.
    PS00022. EGF_1. 4 hits.
    PS01186. EGF_2. 5 hits.
    PS50026. EGF_3. 5 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9DAU5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIATGALLRV LLLLLAFGHS TYGAECDPPC DPQYGFCEAD NVCRCHVGWE    50
    GPLCDKCVTA PGCVNGVCKE PWQCICKDGW DGKFCEIDVR ACTSTPCANN 100
    GTCVDLEKGQ YECSCTPGFS GKDCQHKAGP CVINGSPCQH GGACVDDEGQ 150
    ASHASCLCPP GFSGNFCEIV AATNSCTPNP CENDGVCTDI GGDFRCRCPA 200
    GFVDKTCSRP AICFTILGVL TSLVVLGTVA IVFLNKCETW VSNLRYNHML 250
    RKKKNLLLQY NSGEELAVNI IFPEKIDMTT FNKEAGDEEI 290
    Length:290
    Mass (Da):31,117
    Last modified:June 1, 2001 - v1
    Checksum:iEED42925D5AA267E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC165954 Genomic DNA. No translation available.
    AK005522 mRNA. Translation: BAB24096.1.
    RefSeqiNP_001177632.1. NM_001190703.1.
    UniGeneiMm.157069.

    Genome annotation databases

    EnsembliENSMUST00000109843; ENSMUSP00000105469; ENSMUSG00000040856.
    GeneIDi13386.
    KEGGimmu:13386.
    UCSCiuc007pan.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC165954 Genomic DNA. No translation available.
    AK005522 mRNA. Translation: BAB24096.1 .
    RefSeqi NP_001177632.1. NM_001190703.1.
    UniGenei Mm.157069.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000109843 ; ENSMUSP00000105469 ; ENSMUSG00000040856 .
    GeneIDi 13386.
    KEGGi mmu:13386.
    UCSCi uc007pan.2. mouse.

    Organism-specific databases

    CTDi 8788.
    MGIi MGI:94900. Dlk1.

    Phylogenomic databases

    GeneTreei ENSGT00750000117426.
    HOGENOMi HOG000072581.
    HOVERGENi HBG007065.

    Miscellaneous databases

    ChiTaRSi DLK1. mouse.
    NextBioi 283744.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q9DAU5.

    Family and domain databases

    InterProi IPR000742. EG-like_dom.
    IPR001881. EGF-like_Ca-bd_dom.
    IPR013032. EGF-like_CS.
    IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
    [Graphical view ]
    Pfami PF00008. EGF. 3 hits.
    [Graphical view ]
    SMARTi SM00181. EGF. 4 hits.
    SM00179. EGF_CA. 1 hit.
    [Graphical view ]
    PROSITEi PS00010. ASX_HYDROXYL. 1 hit.
    PS00022. EGF_1. 4 hits.
    PS01186. EGF_2. 5 hits.
    PS50026. EGF_3. 5 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: PlacentaImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: PlacentaImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: PlacentaImported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: PlacentaImported.
    5. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: PlacentaImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: PlacentaImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: PlacentaImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: PlacentaImported.
    9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    10. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ9DAU5_MOUSE
    AccessioniPrimary (citable) accession number: Q9DAU5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2001
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 92 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3