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Protein

Small integral membrane protein 23

Gene

Smim23

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Small integral membrane protein 23
Gene namesi
Name:Smim23
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1916601. Smim23.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 31CytoplasmicSequence analysisAdd BLAST31
Transmembranei32 – 52Helical; Signal-anchor for type II membrane proteinSequence analysisAdd BLAST21
Topological domaini53 – 136ExtracellularSequence analysisAdd BLAST84

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003412381 – 136Small integral membrane protein 23Add BLAST136

Proteomic databases

PaxDbiQ9DAL0.
PRIDEiQ9DAL0.

Expressioni

Gene expression databases

BgeeiENSMUSG00000020270.
ExpressionAtlasiQ9DAL0. baseline and differential.
GenevisibleiQ9DAL0. MM.

Structurei

3D structure databases

ProteinModelPortaliQ9DAL0.
SMRiQ9DAL0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili92 – 124Sequence analysisAdd BLAST33

Keywords - Domaini

Coiled coil, Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410J1DG. Eukaryota.
ENOG41117EA. LUCA.
GeneTreeiENSGT00390000017300.
HOGENOMiHOG000111519.
HOVERGENiHBG107641.
InParanoidiQ9DAL0.
OMAiEYQTDEP.
OrthoDBiEOG091G13CI.
TreeFamiTF338699.

Family and domain databases

InterProiView protein in InterPro
IPR027880. DUF4635.
PfamiView protein in Pfam
PF15466. DUF4635. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9DAL0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIQKTGCRG REAAEVVEQR RRSHHCDDRK QTLLALLILV LYLGMGISGS
60 70 80 90 100
SWEVSGQTKD CNHFQNPVTP QGFEYQTKEP AEEPLRTLRK WLKINLHGFL
110 120 130
EKLEKEVREL EQLVRDLEFW LDALLGDLRP EDPCFT
Length:136
Mass (Da):15,821
Last modified:June 1, 2001 - v1
Checksum:iA9F58AF38643284E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK005748 mRNA. Translation: BAB24220.1.
AL669951 Genomic DNA. Translation: CAI26096.1.
CCDSiCCDS48767.1.
RefSeqiNP_081326.1. NM_027050.1.
UniGeneiMm.65488.

Genome annotation databases

EnsembliENSMUST00000020508; ENSMUSP00000020508; ENSMUSG00000020270.
GeneIDi69351.
KEGGimmu:69351.
UCSCiuc007ikb.2. mouse.

Similar proteinsi

Entry informationi

Entry nameiSIM23_MOUSE
AccessioniPrimary (citable) accession number: Q9DAL0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: June 1, 2001
Last modified: July 5, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot