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Protein
Submitted name:

Signal sequence receptor, delta

Gene

Ssr4

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Signal sequence receptor, deltaImported
Submitted name:
Signal sequence receptor, delta, isoform CRA_cImported
Submitted name:
Translocon-associated protein subunit deltaImported
Gene namesi
Name:Ssr4Imported
ORF Names:mCG_8079Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome X

Organism-specific databases

MGIiMGI:1099464. Ssr4.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei146 – 165HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500878555824 – 173Sequence analysisAdd BLAST150

Expressioni

Gene expression databases

BgeeiENSMUSG00000002014.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000131386.

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4088. Eukaryota.
ENOG4111GCB. LUCA.
GeneTreeiENSGT00390000008992.
HOGENOMiHOG000293353.
HOVERGENiHBG002293.
OMAiYMAFSAK.
OrthoDBiEOG091G0UKL.

Family and domain databases

InterProiIPR008855. TRAP-delta.
[Graphical view]
PANTHERiPTHR12731. PTHR12731. 1 hit.
PfamiPF05404. TRAP-delta. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9D8L3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAMASFGAL ALLLLSGLSC CSAEACLEPQ ITPSYYTTSD AVISTETVFI
60 70 80 90 100
VEISLTCKNR VQNMALYADV SGKQFPVTRG QDVGRYQVSW SLEHKSAHAG
110 120 130 140 150
TYEVRFFDEE SYSLLRKAQR NNEDVSIIPP LFTVSVDHRG TWNGPWVSTE
160 170
VLAAVIGIVI YYLAFSAKSH IQA
Length:173
Mass (Da):19,008
Last modified:June 1, 2001 - v1
Checksum:iCE672C848CD47EBB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL672094 Genomic DNA. No translation available.
BC008172 mRNA. Translation: AAH08172.1.
AK007921 mRNA. Translation: BAB25352.1.
CH466650 Genomic DNA. Translation: EDL29876.1.
RefSeqiNP_001159952.1. NM_001166480.1.
UniGeneiMm.831.

Genome annotation databases

EnsembliENSMUST00000166518; ENSMUSP00000131386; ENSMUSG00000002014.
GeneIDi20832.
UCSCiuc009tms.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL672094 Genomic DNA. No translation available.
BC008172 mRNA. Translation: AAH08172.1.
AK007921 mRNA. Translation: BAB25352.1.
CH466650 Genomic DNA. Translation: EDL29876.1.
RefSeqiNP_001159952.1. NM_001166480.1.
UniGeneiMm.831.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000131386.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000166518; ENSMUSP00000131386; ENSMUSG00000002014.
GeneIDi20832.
UCSCiuc009tms.2. mouse.

Organism-specific databases

CTDi6748.
MGIiMGI:1099464. Ssr4.

Phylogenomic databases

eggNOGiKOG4088. Eukaryota.
ENOG4111GCB. LUCA.
GeneTreeiENSGT00390000008992.
HOGENOMiHOG000293353.
HOVERGENiHBG002293.
OMAiYMAFSAK.
OrthoDBiEOG091G0UKL.

Miscellaneous databases

ChiTaRSiSsr4. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000002014.

Family and domain databases

InterProiIPR008855. TRAP-delta.
[Graphical view]
PANTHERiPTHR12731. PTHR12731. 1 hit.
PfamiPF05404. TRAP-delta. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9D8L3_MOUSE
AccessioniPrimary (citable) accession number: Q9D8L3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: November 30, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.