Unreviewed, UniProtKB/TrEMBL Q9D859 (Q9D859_MOUSE)

Names and origin

Protein names

Submitted name:
    Putative uncharacterized protein EMBL BAB25667.1

Gene names

Name:

Rac1 MGI 97845

Organism

Mus musculus (Mouse) EMBL BAB25667.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

Protein attributes

Sequence length	192 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the small GTPase superfamily. Rho family.

Ontologies

Keywords
Cellular component	Membrane Spearmint SPM003578
Ligand	GTP-binding RuleBase RU003312V0 Spearmint SPM003578 Nucleotide-binding
Gene Ontology (GO)
Biological process	axon guidance Inferred from mutant phenotype. Source: MGI cell adhesion Inferred from direct assay. Source: MGI cerebral cortex radially oriented cell migration Inferred from mutant phenotype. Source: MGI cytoskeleton organization Inferred from direct assay. Source: MGI dendrite development Inferred from direct assay. Source: MGI embryonic olfactory bulb interneuron precursor migration Inferred from mutant phenotype. Source: MGI endocytosis Inferred from direct assay. Source: MGI hyperosmotic response Inferred from direct assay. Source: MGI lamellipodium assembly Inferred from direct assay. Source: MGI positive regulation of actin filament polymerization Inferred from direct assay. Source: MGI positive regulation of phosphoinositide 3-kinase activity Inferred from mutant phenotype. Source: MGI regulation of cell migration Inferred from mutant phenotype. Source: MGI small GTPase mediated signal transduction Inferred from direct assay. Source: MGI
Cellular component	cytoplasmic membrane-bounded vesicle Inferred from direct assay. Source: MGI extrinsic to plasma membrane Inferred from direct assay. Source: MGI lamellipodium Inferred from direct assay. Source: MGI membrane fraction Inferred from direct assay. Source: MGI
Molecular function	GTP binding Inferred from direct assay. Source: MGI GTPase activity Inferred from direct assay. Source: MGI
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9D859-1 [UniParc]. Last modified June 1, 2001. Version 1. Checksum: 59EC483A45E45A67	FASTA	192	21,464
	10 20 30 40 50 60 MQAIKCVVVG DGAVGKTCLL ISYTTNAFPG EYIPTVFDNY SANVMVDGKP VNLGLWDTAG 70 80 90 100 110 120 QEDYERLRPL SYPQTDVFLI CFSLVSPASF ENVRAKWYPE VRHHCPNTPI ILVGTKLDLR 130 140 150 160 170 180 DDKDTIEKLK EKKLTPITYP QGLAMAKEIG AVKYLECSAL TQRGLKTVFD EAIRAVLCPP 190 PVKKRKRKCL LL

References

[1]

"The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y. Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: C57BL/6J EMBL BAB25667.1. Tissue: Small intestine EMBL BAB25667.1.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK008435 mRNA. Translation: BAB25667.1.
IPI	IPI00761613.
UniGene	Mm.292510 Mm.475073
3D structure databases
HSSP	HSSP built from PDB template 1DS6 based on UniProtKB P15153.
SMR	Q9D859. Positions 1-192.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9D859.
Genome annotation databases
Ensembl	ENSMUST00000080537; ENSMUSP00000079380; ENSMUSG00000001847; Mus musculus. [Genome view]
Organism-specific databases
MGI	MGI:97845. Rac1.
Phylogenomic databases
HOVERGEN	Q9D859.
Gene expression databases
ArrayExpress	Q9D859.
Bgee	Q9D859.
Genevestigator	Q9D859.
Family and domain databases
InterPro	IPR003578. GTPase_Rho. IPR013753. Ras. IPR001806. Ras_GTPase. IPR005225. Small_GTP_bd. [Graphical view]
Pfam	PF00071. Ras. 1 hit. [Graphical view]
PRINTS	PR00449. RASTRNSFRMNG.
SMART	SM00174. RHO. 1 hit. [Graphical view]
TIGRFAMs	TIGR00231. small_GTP. 1 hit.
PROSITE	PS51420. RHO. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
SOURCE	Search...

Entry information

Entry name

Q9D859_MOUSE

Accession

Primary (citable) accession number: Q9D859

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2001
Last sequence update:	June 1, 2001
Last modified:	January 19, 2010
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)