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Protein

ATP synthase subunit s-like protein

Gene

Atp5sl

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
ATP synthase subunit s-like protein
Gene namesi
Name:Atp5sl
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1913599. Atp5sl.

Subcellular locationi

GO - Cellular componenti

  1. mitochondrion Source: MGI
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 258258ATP synthase subunit s-like proteinPRO_0000318697Add
BLAST

Proteomic databases

MaxQBiQ9D7K5.
PaxDbiQ9D7K5.
PRIDEiQ9D7K5.

PTM databases

PhosphoSiteiQ9D7K5.

Expressioni

Gene expression databases

BgeeiQ9D7K5.
CleanExiMM_ATP5SL.
ExpressionAtlasiQ9D7K5. baseline and differential.
GenevestigatoriQ9D7K5.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000076563.

Structurei

3D structure databases

ProteinModelPortaliQ9D7K5.
SMRiQ9D7K5. Positions 82-213.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP synthase subunit s family.Curated

Phylogenomic databases

eggNOGiNOG318773.
GeneTreeiENSGT00530000063680.
HOGENOMiHOG000034116.
HOVERGENiHBG056046.
InParanoidiQ9D7K5.
OMAiGAVKFRD.
OrthoDBiEOG7QK0CS.

Family and domain databases

InterProiIPR026303. ATP5SL.
[Graphical view]
PANTHERiPTHR13318. PTHR13318. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9D7K5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAPRAVLHL GAREWNGRAR RIHGMSELVT PDSSREKKRT LLQFLSDHFQ
60 70 80 90 100
DIQTLREYLL QKQISKVNRE NRSFTNIQEK YGPYVAGAVF ILKQGGAVKF
110 120 130 140 150
QDKEEWIRPN NRSHFLAEIQ KFQNVPVEAV DASGCAINYQ GLSNLLPLKE
160 170 180 190 200
LRSLSLQRCP NLDDWCLSRL YLLAGSLQEL SLAGCPRISE RGLACLHHLQ
210 220 230 240 250
NLRRLDISDL PAVSHPGLTQ ILVEEMLPHC EVLGADWAQN LKLEPDKQPP

DTSTPLSS
Length:258
Mass (Da):29,179
Last modified:June 1, 2001 - v1
Checksum:iC43E4A5C986CE7F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK009150 mRNA. Translation: BAB26107.1.
CCDSiCCDS71917.1.
RefSeqiNP_001277416.1. NM_001290487.1.
UniGeneiMm.159956.

Genome annotation databases

EnsembliENSMUST00000077338; ENSMUSP00000076563; ENSMUSG00000057229.
GeneIDi66349.
KEGGimmu:66349.
UCSCiuc009fte.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK009150 mRNA. Translation: BAB26107.1.
CCDSiCCDS71917.1.
RefSeqiNP_001277416.1. NM_001290487.1.
UniGeneiMm.159956.

3D structure databases

ProteinModelPortaliQ9D7K5.
SMRiQ9D7K5. Positions 82-213.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000076563.

PTM databases

PhosphoSiteiQ9D7K5.

Proteomic databases

MaxQBiQ9D7K5.
PaxDbiQ9D7K5.
PRIDEiQ9D7K5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000077338; ENSMUSP00000076563; ENSMUSG00000057229.
GeneIDi66349.
KEGGimmu:66349.
UCSCiuc009fte.1. mouse.

Organism-specific databases

CTDi55101.
MGIiMGI:1913599. Atp5sl.

Phylogenomic databases

eggNOGiNOG318773.
GeneTreeiENSGT00530000063680.
HOGENOMiHOG000034116.
HOVERGENiHBG056046.
InParanoidiQ9D7K5.
OMAiGAVKFRD.
OrthoDBiEOG7QK0CS.

Miscellaneous databases

PROiQ9D7K5.
SOURCEiSearch...

Gene expression databases

BgeeiQ9D7K5.
CleanExiMM_ATP5SL.
ExpressionAtlasiQ9D7K5. baseline and differential.
GenevestigatoriQ9D7K5.

Family and domain databases

InterProiIPR026303. ATP5SL.
[Graphical view]
PANTHERiPTHR13318. PTHR13318. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Tongue.

Entry informationi

Entry nameiAT5SL_MOUSE
AccessioniPrimary (citable) accession number: Q9D7K5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: June 1, 2001
Last modified: January 7, 2015
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.