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Q9D7G0

- PRPS1_MOUSE

UniProt

Q9D7G0 - PRPS1_MOUSE

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Protein
Ribose-phosphate pyrophosphokinase 1
Gene
Prps1
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the synthesis of phosphoribosylpyrophosphate (PRPP) that is essential for nucleotide synthesis.UniRule annotation

Catalytic activityi

ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate.UniRule annotation

Cofactori

Magnesium By similarity.UniRule annotation

Enzyme regulationi

Activated by magnesium and inorganic phosphate.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi128 – 1281Magnesium Reviewed prediction
Metal bindingi130 – 1301Magnesium Reviewed prediction
Binding sitei130 – 1301ATP By similarity
Metal bindingi139 – 1391Magnesium Reviewed prediction
Metal bindingi143 – 1431Magnesium Reviewed prediction

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi96 – 1016ATP By similarity

GO - Molecular functioni

  1. ADP binding Source: Ensembl
  2. AMP binding Source: Ensembl
  3. ATP binding Source: UniProtKB
  4. GDP binding Source: Ensembl
  5. carbohydrate binding Source: Ensembl
  6. kinase activity Source: UniProtKB-KW
  7. magnesium ion binding Source: Ensembl
  8. protein homodimerization activity Source: UniProtKB
  9. ribose phosphate diphosphokinase activity Source: UniProtKB

GO - Biological processi

  1. 5-phosphoribose 1-diphosphate biosynthetic process Source: UniProtKB-UniPathway
  2. AMP biosynthetic process Source: Ensembl
  3. organ regeneration Source: Ensembl
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Biological processi

Nucleotide biosynthesis

Keywords - Ligandi

ATP-binding, Magnesium, Metal-binding, Nucleotide-binding

Enzyme and pathway databases

UniPathwayiUPA00087; UER00172.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribose-phosphate pyrophosphokinase 1 (EC:2.7.6.1)
Alternative name(s):
Phosphoribosyl pyrophosphate synthase I
Short name:
PRS-I
Gene namesi
Name:Prps1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome X

Organism-specific databases

MGIiMGI:97775. Prps1.

Subcellular locationi

GO - Cellular componenti

  1. ribose phosphate diphosphokinase complex Source: Ensembl
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 318317Ribose-phosphate pyrophosphokinase 1UniRule annotation
PRO_0000141072Add
BLAST

Proteomic databases

MaxQBiQ9D7G0.
PaxDbiQ9D7G0.
PRIDEiQ9D7G0.

2D gel databases

REPRODUCTION-2DPAGEQ9D7G0.

PTM databases

PhosphoSiteiQ9D7G0.

Expressioni

Developmental stagei

Expressed in both vestibular and cochlea hair cells in early developing and postnatal mice and can also be detected in the spiral ganglion cells in at post natal day 6.1 Publication

Gene expression databases

ArrayExpressiQ9D7G0.
BgeeiQ9D7G0.
CleanExiMM_PRPS1.
GenevestigatoriQ9D7G0.

Interactioni

Subunit structurei

Homodimer. The active form is probably a hexamer composed of 3 homodimers By similarity.

Protein-protein interaction databases

BioGridi202401. 1 interaction.
IntActiQ9D7G0. 2 interactions.
MINTiMINT-1858366.

Structurei

3D structure databases

ProteinModelPortaliQ9D7G0.
SMRiQ9D7G0. Positions 3-317.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni212 – 22716Binding of phosphoribosylpyrophosphate Reviewed prediction
Add
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0462.
GeneTreeiENSGT00550000074583.
HOVERGENiHBG001520.
InParanoidiQ76MX9.
KOiK00948.
OMAiIQYIRTN.
OrthoDBiEOG7G4QG5.
TreeFamiTF106366.

Family and domain databases

Gene3Di3.40.50.2020. 2 hits.
HAMAPiMF_00583_B. RibP_PPkinase_B.
InterProiIPR000842. PRib_PP_synth_CS.
IPR029099. Pribosyltran_N.
IPR029057. PRTase-like.
IPR005946. Rib-P_diPkinase.
[Graphical view]
PfamiPF14572. Pribosyl_synth. 1 hit.
PF13793. Pribosyltran_N. 1 hit.
[Graphical view]
SUPFAMiSSF53271. SSF53271. 1 hit.
TIGRFAMsiTIGR01251. ribP_PPkin. 1 hit.
PROSITEiPS00114. PRPP_SYNTHASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9D7G0-1 [UniParc]FASTAAdd to Basket

« Hide

MPNIKIFSGS SHQDLSQKIA DRLGLELGKV VTKKFSNQET CVEIGESVRG    50
EDVYIVQSGC GEINDNLMEL LIMINACKIA SASRVTAVIP CFPYARQDKK 100
DKSRAPISAK LVANMLSVAG ADHIITMDLH ASQIQGFFDI PVDNLYAEPA 150
VLKWIRENIS EWRNCTIVSP DAGGAKRVTS IADRLNVDFA LIHKERKKAN 200
EVDRMVLVGD VKDRVAILVD DMADTCGTIC HAADKLLSAG ATRVYAILTH 250
GIFSGPAISR INNACFEAVV VTNTIPQEDK MKHCSKIQVI DISMILAEAI 300
RRTHNGESVS YLFSHVPL 318
Length:318
Mass (Da):34,834
Last modified:July 27, 2011 - v4
Checksum:i46D017E969908BA0
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti183 – 1831D → E in BAB26181. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB025048 mRNA. Translation: BAA84686.1.
AK009265 mRNA. Translation: BAB26181.1.
AK011304 mRNA. Translation: BAB27530.1.
AK089009 mRNA. Translation: BAC40697.1.
AK165524 mRNA. Translation: BAE38237.1.
AK165987 mRNA. Translation: BAE38503.1.
AK166856 mRNA. Translation: BAE39073.1.
AL672297 Genomic DNA. Translation: CAM14818.1.
CH466616 Genomic DNA. Translation: EDL23928.1.
CH466616 Genomic DNA. Translation: EDL23929.1.
BC054772 mRNA. Translation: AAH54772.1.
CCDSiCCDS30439.1.
RefSeqiNP_067438.1. NM_021463.4.
UniGeneiMm.287178.

Genome annotation databases

EnsembliENSMUST00000033809; ENSMUSP00000033809; ENSMUSG00000031432.
GeneIDi19139.
KEGGimmu:19139.
UCSCiuc009uky.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB025048 mRNA. Translation: BAA84686.1 .
AK009265 mRNA. Translation: BAB26181.1 .
AK011304 mRNA. Translation: BAB27530.1 .
AK089009 mRNA. Translation: BAC40697.1 .
AK165524 mRNA. Translation: BAE38237.1 .
AK165987 mRNA. Translation: BAE38503.1 .
AK166856 mRNA. Translation: BAE39073.1 .
AL672297 Genomic DNA. Translation: CAM14818.1 .
CH466616 Genomic DNA. Translation: EDL23928.1 .
CH466616 Genomic DNA. Translation: EDL23929.1 .
BC054772 mRNA. Translation: AAH54772.1 .
CCDSi CCDS30439.1.
RefSeqi NP_067438.1. NM_021463.4.
UniGenei Mm.287178.

3D structure databases

ProteinModelPortali Q9D7G0.
SMRi Q9D7G0. Positions 3-317.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 202401. 1 interaction.
IntActi Q9D7G0. 2 interactions.
MINTi MINT-1858366.

Chemistry

BindingDBi Q9D7G0.

PTM databases

PhosphoSitei Q9D7G0.

2D gel databases

REPRODUCTION-2DPAGE Q9D7G0.

Proteomic databases

MaxQBi Q9D7G0.
PaxDbi Q9D7G0.
PRIDEi Q9D7G0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000033809 ; ENSMUSP00000033809 ; ENSMUSG00000031432 .
GeneIDi 19139.
KEGGi mmu:19139.
UCSCi uc009uky.2. mouse.

Organism-specific databases

CTDi 5631.
MGIi MGI:97775. Prps1.

Phylogenomic databases

eggNOGi COG0462.
GeneTreei ENSGT00550000074583.
HOVERGENi HBG001520.
InParanoidi Q76MX9.
KOi K00948.
OMAi IQYIRTN.
OrthoDBi EOG7G4QG5.
TreeFami TF106366.

Enzyme and pathway databases

UniPathwayi UPA00087 ; UER00172 .

Miscellaneous databases

ChiTaRSi PRPS1. mouse.
NextBioi 295766.
PROi Q9D7G0.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q9D7G0.
Bgeei Q9D7G0.
CleanExi MM_PRPS1.
Genevestigatori Q9D7G0.

Family and domain databases

Gene3Di 3.40.50.2020. 2 hits.
HAMAPi MF_00583_B. RibP_PPkinase_B.
InterProi IPR000842. PRib_PP_synth_CS.
IPR029099. Pribosyltran_N.
IPR029057. PRTase-like.
IPR005946. Rib-P_diPkinase.
[Graphical view ]
Pfami PF14572. Pribosyl_synth. 1 hit.
PF13793. Pribosyltran_N. 1 hit.
[Graphical view ]
SUPFAMi SSF53271. SSF53271. 1 hit.
TIGRFAMsi TIGR01251. ribP_PPkin. 1 hit.
PROSITEi PS00114. PRPP_SYNTHASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Mouse phosphoribosylpyrophosphate synthetase subunit I (PRS I)."
    Seki N., Hattori A., Hayashi A., Kozuma S., Muramatsu M., Saito T.
    Submitted (MAR-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J and NOD.
    Tissue: Lung, Thymus and Tongue.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  4. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6.
    Tissue: Brain.
  6. Lubec G., Klug S.
    Submitted (MAR-2007) to UniProtKB
    Cited for: PROTEIN SEQUENCE OF 35-49; 244-260 AND 303-318, IDENTIFICATION BY MASS SPECTROMETRY.
    Tissue: Hippocampus.
  7. "Loss-of-function mutations in the PRPS1 gene cause a type of nonsyndromic X-linked sensorineural deafness, DFN2."
    Liu X., Han D., Li J., Han B., Ouyang X., Cheng J., Li X., Jin Z., Wang Y., Bitner-Glindzicz M., Kong X., Xu H., Kantardzhieva A., Eavey R.D., Seidman C.E., Seidman J.G., Du L.L., Chen Z.Y.
    , Dai P., Teng M., Yan D., Yuan H.
    Am. J. Hum. Genet. 86:65-71(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: DEVELOPMENTAL STAGE.

Entry informationi

Entry nameiPRPS1_MOUSE
AccessioniPrimary (citable) accession number: Q9D7G0
Secondary accession number(s): Q76MX9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: July 27, 2011
Last modified: July 9, 2014
This is version 110 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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