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Q9D6K8 (FUND2_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
FUN14 domain-containing protein 2
Alternative name(s):
Hepatitis C virus core-binding protein 6
Gene names
Name:Fundc2
Synonyms:Hcbp6
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length151 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the FUN14 family.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentmitochondrion

Inferred from electronic annotation. Source: Ensembl

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 151151FUN14 domain-containing protein 2
PRO_0000314617

Experimental info

Sequence conflict30 – 312KL → NS in BAB29513. Ref.2
Sequence conflict731A → D in BAC27304. Ref.2

Sequences

Sequence LengthMass (Da)Tools
Q9D6K8 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: 7EC4C8B9301D64ED

FASTA15116,564
        10         20         30         40         50         60 
MAANSQGNFD GKFEALDLAE LTKKQPWWRK LFGQESGPSA EKYSVATQLV IGGVTGWCTG 

        70         80         90        100        110        120 
FVFQKVGKLA ATAVGGGFFL LQLANHTGYI KVDWQRVEKD MKKAKEQLKI RKNKQIPTEV 

       130        140        150 
KSKAEEVVSF VKKNVLVTGG FFGGFLLGMA S 

« Hide

References

« Hide 'large scale' references
[1]"Identification and sequence analysis of a mouse homologous gene HCBP6."
Cheng J., Li K., Wang L.
Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: C57BL/6.
[2]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J.
Tissue: Forelimb, Head and Hippocampus.
[3]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J.
[4]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6.
Tissue: Brain, Eye and Testis.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY234858 mRNA. Translation: AAO89275.1.
AK013460 mRNA. Translation: BAB28867.1.
AK014705 mRNA. Translation: BAB29513.1.
AK031214 mRNA. Translation: BAC27304.1.
AL731844 Genomic DNA. Translation: CAM15582.1.
BC042794 mRNA. Translation: AAH42794.1.
BC049566 mRNA. Translation: AAH49566.2.
BC061464 mRNA. Translation: AAH61464.1.
CCDSCCDS30239.1.
RefSeqNP_080402.3. NM_026126.4.
UniGeneMm.126404.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10090.ENSMUSP00000033541.

PTM databases

PhosphoSiteQ9D6K8.

Proteomic databases

MaxQBQ9D6K8.
PaxDbQ9D6K8.
PRIDEQ9D6K8.

Protocols and materials databases

DNASU67391.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000033541; ENSMUSP00000033541; ENSMUSG00000031198.
GeneID67391.
KEGGmmu:67391.
UCSCuc009tpu.2. mouse.

Organism-specific databases

CTD65991.
MGIMGI:1914641. Fundc2.

Phylogenomic databases

eggNOGNOG249575.
GeneTreeENSGT00390000003926.
HOGENOMHOG000232100.
HOVERGENHBG054805.
InParanoidQ9D6K8.
OMATKKQPWW.
OrthoDBEOG7PCJJT.
PhylomeDBQ9D6K8.
TreeFamTF300280.

Gene expression databases

BgeeQ9D6K8.
CleanExMM_FUNDC2.
GenevestigatorQ9D6K8.

Family and domain databases

InterProIPR007014. FUN14.
[Graphical view]
PfamPF04930. FUN14. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio324436.
PROQ9D6K8.
SOURCESearch...

Entry information

Entry nameFUND2_MOUSE
AccessionPrimary (citable) accession number: Q9D6K8
Secondary accession number(s): Q80VT2 expand/collapse secondary AC list , Q80YD9, Q8BSM8, Q9D617
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: June 1, 2001
Last modified: July 9, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot