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Q9D338

- RM19_MOUSE

UniProt

Q9D338 - RM19_MOUSE

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Protein

39S ribosomal protein L19, mitochondrial

Gene

Mrpl19

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L19, mitochondrial
Short name:
L19mt
Short name:
MRP-L19
Gene namesi
Name:Mrpl19
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 6

Organism-specific databases

MGIiMGI:1926274. Mrpl19.

Subcellular locationi

GO - Cellular componenti

  1. mitochondrial ribosome Source: MGI
  2. mitochondrion Source: MGI
  3. nuclear membrane Source: Ensembl
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 29239S ribosomal protein L19, mitochondrialPRO_0000030474
Transit peptidei1 – ?MitochondrionSequence Analysis

Proteomic databases

MaxQBiQ9D338.
PaxDbiQ9D338.
PRIDEiQ9D338.

PTM databases

PhosphoSiteiQ9D338.

Expressioni

Gene expression databases

BgeeiQ9D338.
CleanExiMM_MRPL19.
GenevestigatoriQ9D338.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000032124.

Structurei

3D structure databases

ProteinModelPortaliQ9D338.
SMRiQ9D338. Positions 87-205.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L19P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiCOG0335.
GeneTreeiENSGT00390000009415.
HOVERGENiHBG023932.
InParanoidiQ9D338.
KOiK02884.
OMAiRWERPNF.
OrthoDBiEOG7GXPCC.
PhylomeDBiQ9D338.
TreeFamiTF320270.

Family and domain databases

InterProiIPR001857. Ribosomal_L19.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR15680. PTHR15680. 1 hit.
PfamiPF01245. Ribosomal_L19. 1 hit.
[Graphical view]
PRINTSiPR00061. RIBOSOMALL19.
SUPFAMiSSF50104. SSF50104. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9D338-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAASMAESCR ASLYLARSVR MARPRLAAFA SDACRVCTGP SRFQSTGPSE
60 70 80 90 100
PGGFKPPPKP VIVDRRRVPE DERRFLSPEF IPPRGRTNPL KFKIERKDML
110 120 130 140 150
DRRKVLPIPE FYVGSILRVT TADPYASGKT SQFLGICIKR SGNGLGATFT
160 170 180 190 200
LRNTIEGQGV EICFELYNPR IQEIQVVKLE KRLDDNLLYL RDALPEYSTF
210 220 230 240 250
DVNMKPVPQE ACQEVPVNKL KVKMKPKPWS KRWERPNFNI KGIRFDLALT
260 270 280 290
EEQMKEAQKW NKPWIEFDMM REYDTSKIEA ALWEEIEASK KS
Length:292
Mass (Da):33,578
Last modified:June 1, 2001 - v1
Checksum:i2D85C99D97A59BF5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK018508 mRNA. Translation: BAB31245.1.
AK050637 mRNA. Translation: BAC34357.1.
BC020315 mRNA. Translation: AAH20315.1.
BC043921 mRNA. Translation: AAH43921.1.
CCDSiCCDS39523.1.
RefSeqiNP_080766.1. NM_026490.2.
UniGeneiMm.276293.

Genome annotation databases

EnsembliENSMUST00000032124; ENSMUSP00000032124; ENSMUSG00000030045.
GeneIDi56284.
KEGGimmu:56284.
UCSCiuc009clf.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK018508 mRNA. Translation: BAB31245.1 .
AK050637 mRNA. Translation: BAC34357.1 .
BC020315 mRNA. Translation: AAH20315.1 .
BC043921 mRNA. Translation: AAH43921.1 .
CCDSi CCDS39523.1.
RefSeqi NP_080766.1. NM_026490.2.
UniGenei Mm.276293.

3D structure databases

ProteinModelPortali Q9D338.
SMRi Q9D338. Positions 87-205.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10090.ENSMUSP00000032124.

PTM databases

PhosphoSitei Q9D338.

Proteomic databases

MaxQBi Q9D338.
PaxDbi Q9D338.
PRIDEi Q9D338.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000032124 ; ENSMUSP00000032124 ; ENSMUSG00000030045 .
GeneIDi 56284.
KEGGi mmu:56284.
UCSCi uc009clf.2. mouse.

Organism-specific databases

CTDi 9801.
MGIi MGI:1926274. Mrpl19.

Phylogenomic databases

eggNOGi COG0335.
GeneTreei ENSGT00390000009415.
HOVERGENi HBG023932.
InParanoidi Q9D338.
KOi K02884.
OMAi RWERPNF.
OrthoDBi EOG7GXPCC.
PhylomeDBi Q9D338.
TreeFami TF320270.

Miscellaneous databases

NextBioi 312188.
PROi Q9D338.
SOURCEi Search...

Gene expression databases

Bgeei Q9D338.
CleanExi MM_MRPL19.
Genevestigatori Q9D338.

Family and domain databases

InterProi IPR001857. Ribosomal_L19.
IPR008991. Translation_prot_SH3-like.
[Graphical view ]
PANTHERi PTHR15680. PTHR15680. 1 hit.
Pfami PF01245. Ribosomal_L19. 1 hit.
[Graphical view ]
PRINTSi PR00061. RIBOSOMALL19.
SUPFAMi SSF50104. SSF50104. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Colon and Thymus.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Retina.

Entry informationi

Entry nameiRM19_MOUSE
AccessioniPrimary (citable) accession number: Q9D338
Secondary accession number(s): Q543I0, Q8R1R0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 26, 2002
Last sequence update: June 1, 2001
Last modified: October 1, 2014
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3