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Q9D338

- RM19_MOUSE

UniProt

Q9D338 - RM19_MOUSE

Protein

39S ribosomal protein L19, mitochondrial

Gene

Mrpl19

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 91 (01 Oct 2014)
      Sequence version 1 (01 Jun 2001)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    39S ribosomal protein L19, mitochondrial
    Short name:
    L19mt
    Short name:
    MRP-L19
    Gene namesi
    Name:Mrpl19
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 6

    Organism-specific databases

    MGIiMGI:1926274. Mrpl19.

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrial ribosome Source: MGI
    2. mitochondrion Source: MGI
    3. nuclear membrane Source: Ensembl

    Keywords - Cellular componenti

    Mitochondrion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini? – 29239S ribosomal protein L19, mitochondrialPRO_0000030474
    Transit peptidei1 – ?MitochondrionSequence Analysis

    Proteomic databases

    MaxQBiQ9D338.
    PaxDbiQ9D338.
    PRIDEiQ9D338.

    PTM databases

    PhosphoSiteiQ9D338.

    Expressioni

    Gene expression databases

    BgeeiQ9D338.
    CleanExiMM_MRPL19.
    GenevestigatoriQ9D338.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000032124.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9D338.
    SMRiQ9D338. Positions 87-205.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L19P family.Curated

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiCOG0335.
    GeneTreeiENSGT00390000009415.
    HOVERGENiHBG023932.
    InParanoidiQ9D338.
    KOiK02884.
    OMAiRWERPNF.
    OrthoDBiEOG7GXPCC.
    PhylomeDBiQ9D338.
    TreeFamiTF320270.

    Family and domain databases

    InterProiIPR001857. Ribosomal_L19.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view]
    PANTHERiPTHR15680. PTHR15680. 1 hit.
    PfamiPF01245. Ribosomal_L19. 1 hit.
    [Graphical view]
    PRINTSiPR00061. RIBOSOMALL19.
    SUPFAMiSSF50104. SSF50104. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9D338-1 [UniParc]FASTAAdd to Basket

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    MAASMAESCR ASLYLARSVR MARPRLAAFA SDACRVCTGP SRFQSTGPSE    50
    PGGFKPPPKP VIVDRRRVPE DERRFLSPEF IPPRGRTNPL KFKIERKDML 100
    DRRKVLPIPE FYVGSILRVT TADPYASGKT SQFLGICIKR SGNGLGATFT 150
    LRNTIEGQGV EICFELYNPR IQEIQVVKLE KRLDDNLLYL RDALPEYSTF 200
    DVNMKPVPQE ACQEVPVNKL KVKMKPKPWS KRWERPNFNI KGIRFDLALT 250
    EEQMKEAQKW NKPWIEFDMM REYDTSKIEA ALWEEIEASK KS 292
    Length:292
    Mass (Da):33,578
    Last modified:June 1, 2001 - v1
    Checksum:i2D85C99D97A59BF5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK018508 mRNA. Translation: BAB31245.1.
    AK050637 mRNA. Translation: BAC34357.1.
    BC020315 mRNA. Translation: AAH20315.1.
    BC043921 mRNA. Translation: AAH43921.1.
    CCDSiCCDS39523.1.
    RefSeqiNP_080766.1. NM_026490.2.
    UniGeneiMm.276293.

    Genome annotation databases

    EnsembliENSMUST00000032124; ENSMUSP00000032124; ENSMUSG00000030045.
    GeneIDi56284.
    KEGGimmu:56284.
    UCSCiuc009clf.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK018508 mRNA. Translation: BAB31245.1 .
    AK050637 mRNA. Translation: BAC34357.1 .
    BC020315 mRNA. Translation: AAH20315.1 .
    BC043921 mRNA. Translation: AAH43921.1 .
    CCDSi CCDS39523.1.
    RefSeqi NP_080766.1. NM_026490.2.
    UniGenei Mm.276293.

    3D structure databases

    ProteinModelPortali Q9D338.
    SMRi Q9D338. Positions 87-205.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000032124.

    PTM databases

    PhosphoSitei Q9D338.

    Proteomic databases

    MaxQBi Q9D338.
    PaxDbi Q9D338.
    PRIDEi Q9D338.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000032124 ; ENSMUSP00000032124 ; ENSMUSG00000030045 .
    GeneIDi 56284.
    KEGGi mmu:56284.
    UCSCi uc009clf.2. mouse.

    Organism-specific databases

    CTDi 9801.
    MGIi MGI:1926274. Mrpl19.

    Phylogenomic databases

    eggNOGi COG0335.
    GeneTreei ENSGT00390000009415.
    HOVERGENi HBG023932.
    InParanoidi Q9D338.
    KOi K02884.
    OMAi RWERPNF.
    OrthoDBi EOG7GXPCC.
    PhylomeDBi Q9D338.
    TreeFami TF320270.

    Miscellaneous databases

    NextBioi 312188.
    PROi Q9D338.
    SOURCEi Search...

    Gene expression databases

    Bgeei Q9D338.
    CleanExi MM_MRPL19.
    Genevestigatori Q9D338.

    Family and domain databases

    InterProi IPR001857. Ribosomal_L19.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view ]
    PANTHERi PTHR15680. PTHR15680. 1 hit.
    Pfami PF01245. Ribosomal_L19. 1 hit.
    [Graphical view ]
    PRINTSi PR00061. RIBOSOMALL19.
    SUPFAMi SSF50104. SSF50104. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Colon and Thymus.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Retina.

    Entry informationi

    Entry nameiRM19_MOUSE
    AccessioniPrimary (citable) accession number: Q9D338
    Secondary accession number(s): Q543I0, Q8R1R0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 26, 2002
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 91 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3