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Q9D1R9 (RL34_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 84. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
60S ribosomal protein L34
Gene names
Name:Rpl34
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length117 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L34e family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   PTMAcetylation
Phosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytosolic large ribosomal subunit

Inferred from electronic annotation. Source: Compara

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 11711660S ribosomal protein L34
PRO_0000131832

Amino acid modifications

Modified residue121Phosphoserine By similarity
Modified residue361N6-acetyllysine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q9D1R9 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: 6775B00B98CB6A30

FASTA11713,293
        10         20         30         40         50         60 
MVQRLTYRRR LSYNTASNKT RLSRTPGNRI VYLYTKKVGK APKSACGVCP GRLRGVRAVR 

        70         80         90        100        110 
PKVLMRLSKT QKHVSRAYGG SMCAKCVRDR IKRAFLIEEQ KIVVKVLKAQ AQSQKAK

« Hide

References

[1]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: BALB/c and C57BL/6J.
Tissue: Embryo.
[2]Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6.
Tissue: Brain, Mammary gland and Thyroid.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK003177 mRNA. Translation: BAB22621.1.
AK146252 mRNA. Translation: BAE27014.1.
CH466532 Genomic DNA. Translation: EDL12210.1.
CH466532 Genomic DNA. Translation: EDL12212.1.
BC028517 mRNA. Translation: AAH28517.1.
BC058118 mRNA. Translation: AAH58118.1.
BC100360 mRNA. Translation: AAI00361.1.
IPIIPI00466153.
RefSeqNP_001005859.1. NM_001005859.2.
NP_001186279.1. NM_001199350.1.
NP_081000.1. NM_026724.1.
XP_001481222.1. XM_001481172.3.
UniGeneMm.140568.
Mm.391636.

3D structure databases

ProteinModelPortalQ9D1R9.
SMRQ9D1R9. Positions 3-115.
ModBaseSearch...

PTM databases

PhosphoSiteQ9D1R9.

Proteomic databases

PaxDbQ9D1R9.
PRIDEQ9D1R9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000062601; ENSMUSP00000086614; ENSMUSG00000062006.
ENSMUST00000079085; ENSMUSP00000078092; ENSMUSG00000062006.
GeneID100043876.
619547.
68436.
KEGGmmu:100043876.
mmu:619547.
mmu:68436.

Organism-specific databases

CTD6164.
619547.
MGIMGI:1915686. Rpl34.

Phylogenomic databases

eggNOGCOG2174.
GeneTreeENSGT00390000008294.
HOGENOMHOG000216922.
HOVERGENHBG024280.
InParanoidQ497V4.
KOK02915.
OMAKKTVQRA.
OrthoDBEOG4RNB9V.

Gene expression databases

BgeeQ9D1R9.
GenevestigatorQ9D1R9.
GermOnlineENSMUSG00000062006. Mus musculus.
ENSMUSG00000068396. Mus musculus.

Family and domain databases

InterProIPR008195. Ribosomal_L34Ae.
IPR018065. Ribosomal_L34e_CS.
[Graphical view]
PANTHERPTHR10759. PTHR10759. 1 hit.
PfamPF01199. Ribosomal_L34e. 1 hit.
[Graphical view]
PRINTSPR01250. RIBOSOMALL34.
PROSITEPS01145. RIBOSOMAL_L34E. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio327176.
SOURCESearch...

Entry information

Entry nameRL34_MOUSE
AccessionPrimary (citable) accession number: Q9D1R9
Secondary accession number(s): Q497V4
Entry history
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: January 23, 2007
Last modified: May 1, 2013
This is version 84 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents