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Protein

60S ribosomal protein L34

Gene

Rpl34

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Component of the large ribosomal subunit.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L34
Gene namesi
Name:Rpl34
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 3

Organism-specific databases

MGIiMGI:1915686 Rpl34

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Endoplasmic reticulum

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001318322 – 11760S ribosomal protein L34Add BLAST116

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei12PhosphoserineBy similarity1
Modified residuei36N6-acetyllysineBy similarity1
Modified residuei43N6-acetyllysineCombined sources1
Cross-linki108Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity

Keywords - PTMi

Acetylation, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

EPDiQ9D1R9
MaxQBiQ9D1R9
PaxDbiQ9D1R9
PeptideAtlasiQ9D1R9
PRIDEiQ9D1R9
TopDownProteomicsiQ9D1R9

PTM databases

iPTMnetiQ9D1R9
PhosphoSitePlusiQ9D1R9
SwissPalmiQ9D1R9

Expressioni

Gene expression databases

BgeeiENSMUSG00000062006
ExpressionAtlasiQ9D1R9 baseline and differential
GenevisibleiQ9D1R9 MM

Interactioni

Subunit structurei

Component of the large ribosomal subunit.By similarity

Protein-protein interaction databases

BioGridi212853, 1 interactor
IntActiQ9D1R9, 2 interactors
MINTiQ9D1R9
STRINGi10090.ENSMUSP00000078092

Structurei

3D structure databases

ProteinModelPortaliQ9D1R9
SMRiQ9D1R9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1790 Eukaryota
COG2174 LUCA
GeneTreeiENSGT00390000008294
HOGENOMiHOG000216922
HOVERGENiHBG024280
InParanoidiQ9D1R9
KOiK02915
OMAiRCGDCVK
OrthoDBiEOG091G0WY7
PhylomeDBiQ9D1R9
TreeFamiTF314326

Family and domain databases

Gene3Di3.40.1800.40, 1 hit
InterProiView protein in InterPro
IPR008195 Ribosomal_L34Ae
IPR038562 Ribosomal_L34Ae_sf
IPR018065 Ribosomal_L34e_CS
PANTHERiPTHR10759 PTHR10759, 1 hit
PfamiView protein in Pfam
PF01199 Ribosomal_L34e, 1 hit
PRINTSiPR01250 RIBOSOMALL34
PROSITEiView protein in PROSITE
PS01145 RIBOSOMAL_L34E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9D1R9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVQRLTYRRR LSYNTASNKT RLSRTPGNRI VYLYTKKVGK APKSACGVCP
60 70 80 90 100
GRLRGVRAVR PKVLMRLSKT QKHVSRAYGG SMCAKCVRDR IKRAFLIEEQ
110
KIVVKVLKAQ AQSQKAK
Length:117
Mass (Da):13,293
Last modified:January 23, 2007 - v2
Checksum:i6775B00B98CB6A30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK003177 mRNA Translation: BAB22621.1
AK146252 mRNA Translation: BAE27014.1
CH466532 Genomic DNA Translation: EDL12210.1
CH466532 Genomic DNA Translation: EDL12212.1
BC028517 mRNA Translation: AAH28517.1
BC058118 mRNA Translation: AAH58118.1
BC100360 mRNA Translation: AAI00361.1
CCDSiCCDS17841.1
RefSeqiNP_001005859.1, NM_001005859.3
NP_001186279.1, NM_001199350.1
NP_001274510.1, NM_001287581.1
NP_081000.1, NM_026724.2
XP_001481222.1, XM_001481172.6
UniGeneiMm.140568
Mm.391636

Genome annotation databases

EnsembliENSMUST00000062601; ENSMUSP00000086614; ENSMUSG00000062006
ENSMUST00000079085; ENSMUSP00000078092; ENSMUSG00000062006
ENSMUST00000196202; ENSMUSP00000142486; ENSMUSG00000062006
GeneIDi100043876
619547
68436
KEGGimmu:100043876
mmu:619547
mmu:68436
UCSCiuc008rjd.2 mouse

Similar proteinsi

Entry informationi

Entry nameiRL34_MOUSE
AccessioniPrimary (citable) accession number: Q9D1R9
Secondary accession number(s): Q497V4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 130 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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