Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

39S ribosomal protein L53, mitochondrial

Gene

Mrpl53

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-5389840. Mitochondrial translation elongation.
R-MMU-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L53, mitochondrial
Short name:
L53mt
Short name:
MRP-L53
Gene namesi
Name:Mrpl53
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:1915749. Mrpl53.

Subcellular locationi

GO - Cellular componenti

  • mitochondrion Source: MGI
  • ribosome Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 11839S ribosomal protein L53, mitochondrialPRO_0000261665
Transit peptidei1 – ?MitochondrionSequence analysis

Proteomic databases

EPDiQ9D1H8.
MaxQBiQ9D1H8.
PaxDbiQ9D1H8.
PeptideAtlasiQ9D1H8.
PRIDEiQ9D1H8.

PTM databases

PhosphoSiteiQ9D1H8.

Expressioni

Gene expression databases

BgeeiENSMUSG00000030037.
CleanExiMM_MRPL53.
GenevisibleiQ9D1H8. MM.

Interactioni

Protein-protein interaction databases

IntActiQ9D1H8. 1 interaction.
MINTiMINT-4126568.
STRINGi10090.ENSMUSP00000109571.

Structurei

3D structure databases

ProteinModelPortaliQ9D1H8.
SMRiQ9D1H8. Positions 13-95.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi99 – 1046Poly-Ala

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410J0VJ. Eukaryota.
ENOG4111ZNN. LUCA.
GeneTreeiENSGT00390000001440.
HOGENOMiHOG000230705.
HOVERGENiHBG057368.
InParanoidiQ9D1H8.
KOiK17434.
OMAiAFASHIQ.
OrthoDBiEOG091G16T7.
PhylomeDBiQ9D1H8.
TreeFamiTF300292.

Family and domain databases

InterProiIPR019716. Ribosomal_L53_mit.
[Graphical view]
PfamiPF10780. MRP_L53. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9D1H8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAALARLGL RPVKLVRVQF CPFEKNVEST RTFLQTVSSE KVRATNLNCS
60 70 80 90 100
VIADVRHDGS EPCVDVLFGD GYRLIMRGAH LTTQEMLSAL ASHIRDRNAA
110
AASAPGADKV APGTSTRR
Length:118
Mass (Da):12,738
Last modified:June 1, 2001 - v1
Checksum:iF44B3229F93765A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK003549 mRNA. Translation: BAB22849.1.
BC065995 mRNA. Translation: AAH65995.1.
BC022162 mRNA. Translation: AAH22162.1.
CCDSiCCDS20272.1.
RefSeqiNP_081020.1. NM_026744.3.
UniGeneiMm.333183.

Genome annotation databases

EnsembliENSMUST00000113938; ENSMUSP00000109571; ENSMUSG00000030037.
GeneIDi68499.
KEGGimmu:68499.
UCSCiuc009cmm.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK003549 mRNA. Translation: BAB22849.1.
BC065995 mRNA. Translation: AAH65995.1.
BC022162 mRNA. Translation: AAH22162.1.
CCDSiCCDS20272.1.
RefSeqiNP_081020.1. NM_026744.3.
UniGeneiMm.333183.

3D structure databases

ProteinModelPortaliQ9D1H8.
SMRiQ9D1H8. Positions 13-95.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9D1H8. 1 interaction.
MINTiMINT-4126568.
STRINGi10090.ENSMUSP00000109571.

PTM databases

PhosphoSiteiQ9D1H8.

Proteomic databases

EPDiQ9D1H8.
MaxQBiQ9D1H8.
PaxDbiQ9D1H8.
PeptideAtlasiQ9D1H8.
PRIDEiQ9D1H8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000113938; ENSMUSP00000109571; ENSMUSG00000030037.
GeneIDi68499.
KEGGimmu:68499.
UCSCiuc009cmm.1. mouse.

Organism-specific databases

CTDi116540.
MGIiMGI:1915749. Mrpl53.

Phylogenomic databases

eggNOGiENOG410J0VJ. Eukaryota.
ENOG4111ZNN. LUCA.
GeneTreeiENSGT00390000001440.
HOGENOMiHOG000230705.
HOVERGENiHBG057368.
InParanoidiQ9D1H8.
KOiK17434.
OMAiAFASHIQ.
OrthoDBiEOG091G16T7.
PhylomeDBiQ9D1H8.
TreeFamiTF300292.

Enzyme and pathway databases

ReactomeiR-MMU-5389840. Mitochondrial translation elongation.
R-MMU-5419276. Mitochondrial translation termination.

Miscellaneous databases

PROiQ9D1H8.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000030037.
CleanExiMM_MRPL53.
GenevisibleiQ9D1H8. MM.

Family and domain databases

InterProiIPR019716. Ribosomal_L53_mit.
[Graphical view]
PfamiPF10780. MRP_L53. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRM53_MOUSE
AccessioniPrimary (citable) accession number: Q9D1H8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: June 1, 2001
Last modified: September 7, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.