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Q9D1F3

- CX040_MOUSE

UniProt

Q9D1F3 - CX040_MOUSE

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Protein
Uncharacterized protein CXorf40 homolog
Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein CXorf40 homolog
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome X

Organism-specific databases

MGIiMGI:1915868. 1110012L19Rik.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 157157Uncharacterized protein CXorf40 homolog
PRO_0000079734Add
BLAST

Proteomic databases

PaxDbiQ9D1F3.
PRIDEiQ9D1F3.

Expressioni

Gene expression databases

BgeeiQ9D1F3.
CleanExiMM_1110012L19RIK.
GenevestigatoriQ9D1F3.

Structurei

3D structure databases

ProteinModelPortaliQ9D1F3.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG45203.
GeneTreeiENSGT00390000012182.
HOGENOMiHOG000231371.
HOVERGENiHBG054454.
InParanoidiA2AF50.
OMAiEERRITW.
OrthoDBiEOG78PVBR.
PhylomeDBiQ9D1F3.
TreeFamiTF332845.

Family and domain databases

InterProiIPR007374. ASCH_domain.
IPR015947. PUA-like_domain.
[Graphical view]
PfamiPF04266. ASCH. 1 hit.
[Graphical view]
SMARTiSM01022. ASCH. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 2 hits.

Sequencei

Sequence statusi: Complete.

Q9D1F3-1 [UniParc]FASTAAdd to Basket

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MKFPCLSFRQ PYAGLILNGV KTLETRWRPL LSSVQKYTIA IHIAHKDWED    50
DEWQEVLMER LGMTWTQIQT LLQAGEKYGR GVIAGLIDIG ETFQCPETLT 100
AEEAVELETQ AVLTNLQLKY LTQVSNPRWL LEPIPRKGGK DIFQVDIPEH 150
LIPLEKE 157
Length:157
Mass (Da):18,059
Last modified:June 1, 2001 - v1
Checksum:iC0C7D33EA4468DB5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK003642 mRNA. Translation: BAB22908.1.
AL672026 Genomic DNA. Translation: CAM23461.1.
BC024574 mRNA. Translation: AAH24574.1.
CCDSiCCDS30174.1.
RefSeqiNP_081063.1. NM_026787.2.
UniGeneiMm.293255.

Genome annotation databases

EnsembliENSMUST00000053981; ENSMUSP00000052765; ENSMUSG00000045237.
GeneIDi68618.
KEGGimmu:68618.
UCSCiuc009tjf.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK003642 mRNA. Translation: BAB22908.1 .
AL672026 Genomic DNA. Translation: CAM23461.1 .
BC024574 mRNA. Translation: AAH24574.1 .
CCDSi CCDS30174.1.
RefSeqi NP_081063.1. NM_026787.2.
UniGenei Mm.293255.

3D structure databases

ProteinModelPortali Q9D1F3.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi Q9D1F3.
PRIDEi Q9D1F3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000053981 ; ENSMUSP00000052765 ; ENSMUSG00000045237 .
GeneIDi 68618.
KEGGi mmu:68618.
UCSCi uc009tjf.1. mouse.

Organism-specific databases

MGIi MGI:1915868. 1110012L19Rik.

Phylogenomic databases

eggNOGi NOG45203.
GeneTreei ENSGT00390000012182.
HOGENOMi HOG000231371.
HOVERGENi HBG054454.
InParanoidi A2AF50.
OMAi EERRITW.
OrthoDBi EOG78PVBR.
PhylomeDBi Q9D1F3.
TreeFami TF332845.

Miscellaneous databases

NextBioi 327572.

Gene expression databases

Bgeei Q9D1F3.
CleanExi MM_1110012L19RIK.
Genevestigatori Q9D1F3.

Family and domain databases

InterProi IPR007374. ASCH_domain.
IPR015947. PUA-like_domain.
[Graphical view ]
Pfami PF04266. ASCH. 1 hit.
[Graphical view ]
SMARTi SM01022. ASCH. 1 hit.
[Graphical view ]
SUPFAMi SSF88697. SSF88697. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N.
    Tissue: Kidney.

Entry informationi

Entry nameiCX040_MOUSE
AccessioniPrimary (citable) accession number: Q9D1F3
Secondary accession number(s): A2AF50
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 21, 2005
Last sequence update: June 1, 2001
Last modified: July 9, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

External Data

Dasty 3

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