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Q9D1F3

- CX040_MOUSE

UniProt

Q9D1F3 - CX040_MOUSE

Protein

Uncharacterized protein CXorf40 homolog

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein CXorf40 homolog
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome X

    Organism-specific databases

    MGIiMGI:1915868. 1110012L19Rik.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 157157Uncharacterized protein CXorf40 homologPRO_0000079734Add
    BLAST

    Proteomic databases

    PaxDbiQ9D1F3.
    PRIDEiQ9D1F3.

    Expressioni

    Gene expression databases

    BgeeiQ9D1F3.
    CleanExiMM_1110012L19RIK.
    GenevestigatoriQ9D1F3.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9D1F3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG45203.
    GeneTreeiENSGT00390000012182.
    HOGENOMiHOG000231371.
    HOVERGENiHBG054454.
    InParanoidiA2AF50.
    OMAiEERRITW.
    OrthoDBiEOG78PVBR.
    PhylomeDBiQ9D1F3.
    TreeFamiTF332845.

    Family and domain databases

    InterProiIPR007374. ASCH_domain.
    IPR015947. PUA-like_domain.
    [Graphical view]
    PfamiPF04266. ASCH. 1 hit.
    [Graphical view]
    SMARTiSM01022. ASCH. 1 hit.
    [Graphical view]
    SUPFAMiSSF88697. SSF88697. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Q9D1F3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKFPCLSFRQ PYAGLILNGV KTLETRWRPL LSSVQKYTIA IHIAHKDWED    50
    DEWQEVLMER LGMTWTQIQT LLQAGEKYGR GVIAGLIDIG ETFQCPETLT 100
    AEEAVELETQ AVLTNLQLKY LTQVSNPRWL LEPIPRKGGK DIFQVDIPEH 150
    LIPLEKE 157
    Length:157
    Mass (Da):18,059
    Last modified:June 1, 2001 - v1
    Checksum:iC0C7D33EA4468DB5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK003642 mRNA. Translation: BAB22908.1.
    AL672026 Genomic DNA. Translation: CAM23461.1.
    BC024574 mRNA. Translation: AAH24574.1.
    CCDSiCCDS30174.1.
    RefSeqiNP_081063.1. NM_026787.2.
    UniGeneiMm.293255.

    Genome annotation databases

    EnsembliENSMUST00000053981; ENSMUSP00000052765; ENSMUSG00000045237.
    GeneIDi68618.
    KEGGimmu:68618.
    UCSCiuc009tjf.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK003642 mRNA. Translation: BAB22908.1 .
    AL672026 Genomic DNA. Translation: CAM23461.1 .
    BC024574 mRNA. Translation: AAH24574.1 .
    CCDSi CCDS30174.1.
    RefSeqi NP_081063.1. NM_026787.2.
    UniGenei Mm.293255.

    3D structure databases

    ProteinModelPortali Q9D1F3.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi Q9D1F3.
    PRIDEi Q9D1F3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000053981 ; ENSMUSP00000052765 ; ENSMUSG00000045237 .
    GeneIDi 68618.
    KEGGi mmu:68618.
    UCSCi uc009tjf.1. mouse.

    Organism-specific databases

    MGIi MGI:1915868. 1110012L19Rik.

    Phylogenomic databases

    eggNOGi NOG45203.
    GeneTreei ENSGT00390000012182.
    HOGENOMi HOG000231371.
    HOVERGENi HBG054454.
    InParanoidi A2AF50.
    OMAi EERRITW.
    OrthoDBi EOG78PVBR.
    PhylomeDBi Q9D1F3.
    TreeFami TF332845.

    Miscellaneous databases

    NextBioi 327572.

    Gene expression databases

    Bgeei Q9D1F3.
    CleanExi MM_1110012L19RIK.
    Genevestigatori Q9D1F3.

    Family and domain databases

    InterProi IPR007374. ASCH_domain.
    IPR015947. PUA-like_domain.
    [Graphical view ]
    Pfami PF04266. ASCH. 1 hit.
    [Graphical view ]
    SMARTi SM01022. ASCH. 1 hit.
    [Graphical view ]
    SUPFAMi SSF88697. SSF88697. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6J.
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: FVB/N.
      Tissue: Kidney.

    Entry informationi

    Entry nameiCX040_MOUSE
    AccessioniPrimary (citable) accession number: Q9D1F3
    Secondary accession number(s): A2AF50
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 21, 2005
    Last sequence update: June 1, 2001
    Last modified: July 9, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

    External Data

    Dasty 3