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Protein

39S ribosomal protein L28, mitochondrial

Gene

Mrpl28

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-5389840. Mitochondrial translation elongation.
R-MMU-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L28, mitochondrial
Short name:
L28mt
Short name:
MRP-L28
Gene namesi
Name:Mrpl28
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 17

Organism-specific databases

MGIiMGI:1915861. Mrpl28.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 5555MitochondrionBy similarityAdd
BLAST
Chaini56 – 25720239S ribosomal protein L28, mitochondrialPRO_0000030507Add
BLAST

Proteomic databases

EPDiQ9D1B9.
MaxQBiQ9D1B9.
PaxDbiQ9D1B9.
PeptideAtlasiQ9D1B9.
PRIDEiQ9D1B9.

PTM databases

iPTMnetiQ9D1B9.
PhosphoSiteiQ9D1B9.

Expressioni

Gene expression databases

BgeeiENSMUSG00000024181.
CleanExiMM_MRPL28.
ExpressionAtlasiQ9D1B9. baseline and differential.
GenevisibleiQ9D1B9. MM.

Interactioni

Subunit structurei

Interacts with OXA1L.By similarity

Protein-protein interaction databases

BioGridi212951. 1 interaction.
MINTiMINT-1843790.
STRINGi10090.ENSMUSP00000025014.

Structurei

3D structure databases

ProteinModelPortaliQ9D1B9.
SMRiQ9D1B9. Positions 2-233.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L28P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3279. Eukaryota.
ENOG410XQHX. LUCA.
GeneTreeiENSGT00390000017359.
HOGENOMiHOG000010298.
HOVERGENiHBG083707.
InParanoidiQ9D1B9.
KOiK02902.
OMAiMSVVVTE.
OrthoDBiEOG091G0IF3.
PhylomeDBiQ9D1B9.
TreeFamiTF313040.

Family and domain databases

InterProiIPR026569. Ribo_L28/L24.
[Graphical view]
PANTHERiPTHR13528. PTHR13528. 1 hit.
PfamiPF00830. Ribosomal_L28. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9D1B9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLHRYPVHL WQKLRLRQGI CARLPAHFLR SLEEERTPTP VHYKPHGTKF
60 70 80 90 100
KINPKNGQRE RVEDVPIPVH YPPESQQGLW GGEGLILGYR YANNDKLSKR
110 120 130 140 150
VKKVWKPQLF TRELYSEILD KKFTVTVTMR TLDLIDEAYG FDFYILKTPK
160 170 180 190 200
EDLGSKFGMD LKRGMLLRLA RQDPHLHPEN PERRAAIYDK YRSFVIPEAE
210 220 230 240 250
AEWVGLTLEE ALEKQRLLEE KDPVPLFKVY VEELVQRLQE QVLSRPAVVQ

KRAGDHA
Length:257
Mass (Da):30,170
Last modified:January 24, 2006 - v3
Checksum:iC011BF7EF537996C
GO

Sequence cautioni

The sequence AAH02293 differs from that shown. Reason: Erroneous initiation. Curated
The sequence AAH05797 differs from that shown. Reason: Erroneous initiation. Curated
The sequence AAH80753 differs from that shown. Reason: Erroneous initiation. Curated
The sequence AAI00323 differs from that shown. Reason: Erroneous initiation. Curated
The sequence BAB22962 differs from that shown. Reason: Erroneous initiation. Curated
The sequence BAC27521 differs from that shown. Reason: Erroneous initiation. Curated
The sequence BAC32780 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK003727 mRNA. Translation: BAB22962.2. Different initiation.
AK031701 mRNA. Translation: BAC27521.1. Different initiation.
AK046544 mRNA. Translation: BAC32780.1. Different initiation.
AK163190 mRNA. Translation: BAE37227.1.
BC002293 mRNA. Translation: AAH02293.2. Different initiation.
BC005797 mRNA. Translation: AAH05797.2. Different initiation.
BC080753 mRNA. Translation: AAH80753.1. Different initiation.
BC100322 mRNA. Translation: AAI00323.1. Different initiation.
BC145680 mRNA. Translation: AAI45681.1.
BC145682 mRNA. Translation: AAI45683.1.
CCDSiCCDS37509.1.
RefSeqiNP_077189.2. NM_024227.3.
UniGeneiMm.273102.

Genome annotation databases

EnsembliENSMUST00000025014; ENSMUSP00000025014; ENSMUSG00000024181.
GeneIDi68611.
KEGGimmu:68611.
UCSCiuc008bdl.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK003727 mRNA. Translation: BAB22962.2. Different initiation.
AK031701 mRNA. Translation: BAC27521.1. Different initiation.
AK046544 mRNA. Translation: BAC32780.1. Different initiation.
AK163190 mRNA. Translation: BAE37227.1.
BC002293 mRNA. Translation: AAH02293.2. Different initiation.
BC005797 mRNA. Translation: AAH05797.2. Different initiation.
BC080753 mRNA. Translation: AAH80753.1. Different initiation.
BC100322 mRNA. Translation: AAI00323.1. Different initiation.
BC145680 mRNA. Translation: AAI45681.1.
BC145682 mRNA. Translation: AAI45683.1.
CCDSiCCDS37509.1.
RefSeqiNP_077189.2. NM_024227.3.
UniGeneiMm.273102.

3D structure databases

ProteinModelPortaliQ9D1B9.
SMRiQ9D1B9. Positions 2-233.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi212951. 1 interaction.
MINTiMINT-1843790.
STRINGi10090.ENSMUSP00000025014.

PTM databases

iPTMnetiQ9D1B9.
PhosphoSiteiQ9D1B9.

Proteomic databases

EPDiQ9D1B9.
MaxQBiQ9D1B9.
PaxDbiQ9D1B9.
PeptideAtlasiQ9D1B9.
PRIDEiQ9D1B9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000025014; ENSMUSP00000025014; ENSMUSG00000024181.
GeneIDi68611.
KEGGimmu:68611.
UCSCiuc008bdl.2. mouse.

Organism-specific databases

CTDi10573.
MGIiMGI:1915861. Mrpl28.

Phylogenomic databases

eggNOGiKOG3279. Eukaryota.
ENOG410XQHX. LUCA.
GeneTreeiENSGT00390000017359.
HOGENOMiHOG000010298.
HOVERGENiHBG083707.
InParanoidiQ9D1B9.
KOiK02902.
OMAiMSVVVTE.
OrthoDBiEOG091G0IF3.
PhylomeDBiQ9D1B9.
TreeFamiTF313040.

Enzyme and pathway databases

ReactomeiR-MMU-5389840. Mitochondrial translation elongation.
R-MMU-5419276. Mitochondrial translation termination.

Miscellaneous databases

PROiQ9D1B9.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000024181.
CleanExiMM_MRPL28.
ExpressionAtlasiQ9D1B9. baseline and differential.
GenevisibleiQ9D1B9. MM.

Family and domain databases

InterProiIPR026569. Ribo_L28/L24.
[Graphical view]
PANTHERiPTHR13528. PTHR13528. 1 hit.
PfamiPF00830. Ribosomal_L28. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRM28_MOUSE
AccessioniPrimary (citable) accession number: Q9D1B9
Secondary accession number(s): A6H5Y0
, Q3TR04, Q497Y8, Q66JU7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 19, 2003
Last sequence update: January 24, 2006
Last modified: September 7, 2016
This is version 109 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.