Q9D1A0 (CI021_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names	Recommended name: UPF0308 protein C9orf21 homolog
Organism	Mus musculus (Mouse)
Taxonomic identifier	10090 [NCBI]
Taxonomic lineage	Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	226 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the UPF0308 family.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 226	226	UPF0308 protein C9orf21 homolog		PRO_0000221625

Sequences

	Sequence		Length	Mass (Da)
	Q9D1A0 [UniParc]. Last modified June 1, 2001. Version 1. Checksum: 9E256CFDEB76FB99	FASTA	226	24,904
	10 20 30 40 50 60 MAAPVTRQVS GCAGRVPSPA GSVTERGQPL AAAVAELPVL DASGRRVTFG ALFRERRAVV 70 80 90 100 110 120 VFVRHFLCYV CKEYVEDLAK IPKSVLREAD VTLIVIGQSS YHHIEPFCKL TGYSHEIYVD 130 140 150 160 170 180 PEREIYKRLG MKRGEEISSS GQSPHIKSNL LSGSLQSLWR AVTGPLFDFQ GDPAQQGGTL 190 200 210 220 ILGPGNNIHF VHRDRNRLDH KPINSVLQLV GVQPVNFMSR PTVIHV

References

[1]

"The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y. Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: C57BL/6J. Tissue: Embryo.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK003782 mRNA. Translation: BAB22993.1. AK006589 mRNA. Translation: BAB24662.1. AK148379 mRNA. Translation: BAE28518.1.
IPI	IPI00133519.
RefSeq	NP_079646.1. NM_025370.2.
UniGene	Mm.227240.
3D structure databases
ProteinModelPortal	Q9D1A0.
ModBase	Search...
Proteomic databases
PRIDE	Q9D1A0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSMUST00000021938; ENSMUSP00000021938; ENSMUSG00000021482.
GeneID	66129.
KEGG	mmu:66129.
UCSC	uc007qyt.1. mouse.
Organism-specific databases
MGI	MGI:1913379. 1110018J18Rik.
Phylogenomic databases
GeneTree	ENSGT00510000048363.
HOGENOM	HBG445673.
HOVERGEN	HBG050959.
InParanoid	Q9D1A0.
OMA	PFGALFR.
PhylomeDB	Q9D1A0.
Gene expression databases
ArrayExpress	Q9D1A0.
Bgee	Q9D1A0.
CleanEx	MM_1110018J18RIK.
Genevestigator	Q9D1A0.
GermOnline	ENSMUSG00000021482. Mus musculus.
Family and domain databases
InterPro	IPR013740. Redoxin. IPR012336. Thioredoxin-like_fold. [Graphical view]
Gene3D	G3DSA:3.40.30.10. Thioredoxin_fold. 2 hits.
Pfam	PF08534. Redoxin. 1 hit. [Graphical view]
SUPFAM	SSF52833. Thiordxn-like_fd. 1 hit.
ProtoNet	Search...
Other
NextBio	458165.

Entry information

Entry name

CI021_MOUSE

Accession

Primary (citable) accession number: Q9D1A0
Secondary accession number(s): Q3UFP2, Q9CVT8

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 13, 2004
Last sequence update:	June 1, 2001
Last modified:	September 21, 2011
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program