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Protein

39S ribosomal protein L45, mitochondrial

Gene

Mrpl45

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L45, mitochondrial
Short name:
L45mt
Short name:
MRP-L45
Gene namesi
Name:Mrpl45
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1914286. Mrpl45.

Subcellular locationi

GO - Cellular componenti

  • mitochondrion Source: MGI
  • ribosome Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 30639S ribosomal protein L45, mitochondrialPRO_0000030564
Transit peptidei1 – ?MitochondrionSequence analysis

Proteomic databases

EPDiQ9D0Q7.
MaxQBiQ9D0Q7.
PaxDbiQ9D0Q7.
PeptideAtlasiQ9D0Q7.
PRIDEiQ9D0Q7.

PTM databases

iPTMnetiQ9D0Q7.
PhosphoSiteiQ9D0Q7.

Expressioni

Gene expression databases

BgeeiQ9D0Q7.
CleanExiMM_MRPL45.
ExpressionAtlasiQ9D0Q7. baseline and differential.
GenevisibleiQ9D0Q7. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000019026.

Structurei

3D structure databases

ProteinModelPortaliQ9D0Q7.
SMRiQ9D0Q7. Positions 56-297.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L45 family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG4599. Eukaryota.
ENOG411019B. LUCA.
GeneTreeiENSGT00390000012679.
HOGENOMiHOG000231165.
HOVERGENiHBG044506.
InParanoidiQ9D0Q7.
KOiK17426.
OMAiMTRGNRY.
OrthoDBiEOG7N0C4Z.
PhylomeDBiQ9D0Q7.
TreeFamiTF105825.

Family and domain databases

InterProiIPR032710. NTF2-like_dom.
IPR007379. Tim44-like_dom.
[Graphical view]
PfamiPF04280. Tim44. 1 hit.
[Graphical view]
SMARTiSM00978. Tim44. 1 hit.
[Graphical view]
SUPFAMiSSF54427. SSF54427. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9D0Q7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAPVPRGLS SLYRTLGWWS RQPILVTQST TVVQVKTKSR FRPPTPEPKY
60 70 80 90 100
KTEKEFLEYA RKAGLVIPQE RLERPIHLAC TAGIFDPYVP PEGDARMSSL
110 120 130 140 150
SKEGLTQRTE RLRKNAASQL AIRKIREFDA NFKTKDFPEK AKDIFIEAHL
160 170 180 190 200
CLNNSDHDRL HTLVTEHCFP DMVWDLKYKT VRWGFVESLE PAQVVHVRCS
210 220 230 240 250
GLVNQSNMYG QVTVRLHTRQ TLAIYDRFGR LMYGQEDVPK DVLEYVVFER
260 270 280 290 300
HLMNPYGSWR MHAKIVPAWA PPKQPILKTL MIPGPQLKPW EEYEETQGEA

QKPQLA
Length:306
Mass (Da):35,411
Last modified:June 1, 2001 - v1
Checksum:i6476F542371FE5DC
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti130 – 1301A → T in AAH20130 (PubMed:15489334).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK011163 mRNA. Translation: BAB27440.1.
AK081922 mRNA. Translation: BAC38375.1.
AK157771 mRNA. Translation: BAE34190.1.
BC020130 mRNA. Translation: AAH20130.1.
CCDSiCCDS25318.1.
RefSeqiNP_080203.1. NM_025927.4.
UniGeneiMm.5381.

Genome annotation databases

EnsembliENSMUST00000019026; ENSMUSP00000019026; ENSMUSG00000018882.
GeneIDi67036.
KEGGimmu:67036.
UCSCiuc007ldx.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK011163 mRNA. Translation: BAB27440.1.
AK081922 mRNA. Translation: BAC38375.1.
AK157771 mRNA. Translation: BAE34190.1.
BC020130 mRNA. Translation: AAH20130.1.
CCDSiCCDS25318.1.
RefSeqiNP_080203.1. NM_025927.4.
UniGeneiMm.5381.

3D structure databases

ProteinModelPortaliQ9D0Q7.
SMRiQ9D0Q7. Positions 56-297.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000019026.

PTM databases

iPTMnetiQ9D0Q7.
PhosphoSiteiQ9D0Q7.

Proteomic databases

EPDiQ9D0Q7.
MaxQBiQ9D0Q7.
PaxDbiQ9D0Q7.
PeptideAtlasiQ9D0Q7.
PRIDEiQ9D0Q7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000019026; ENSMUSP00000019026; ENSMUSG00000018882.
GeneIDi67036.
KEGGimmu:67036.
UCSCiuc007ldx.2. mouse.

Organism-specific databases

CTDi84311.
MGIiMGI:1914286. Mrpl45.

Phylogenomic databases

eggNOGiKOG4599. Eukaryota.
ENOG411019B. LUCA.
GeneTreeiENSGT00390000012679.
HOGENOMiHOG000231165.
HOVERGENiHBG044506.
InParanoidiQ9D0Q7.
KOiK17426.
OMAiMTRGNRY.
OrthoDBiEOG7N0C4Z.
PhylomeDBiQ9D0Q7.
TreeFamiTF105825.

Miscellaneous databases

PROiQ9D0Q7.
SOURCEiSearch...

Gene expression databases

BgeeiQ9D0Q7.
CleanExiMM_MRPL45.
ExpressionAtlasiQ9D0Q7. baseline and differential.
GenevisibleiQ9D0Q7. MM.

Family and domain databases

InterProiIPR032710. NTF2-like_dom.
IPR007379. Tim44-like_dom.
[Graphical view]
PfamiPF04280. Tim44. 1 hit.
[Graphical view]
SMARTiSM00978. Tim44. 1 hit.
[Graphical view]
SUPFAMiSSF54427. SSF54427. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Embryo and Head.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  3. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Brain, Brown adipose tissue, Heart, Kidney, Liver and Spleen.

Entry informationi

Entry nameiRM45_MOUSE
AccessioniPrimary (citable) accession number: Q9D0Q7
Secondary accession number(s): Q3TZL8, Q8VDW2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2003
Last sequence update: June 1, 2001
Last modified: July 6, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.