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Protein

RCC1-like G exchanging factor-like protein

Gene

Rcc1l

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • poly(A) RNA binding Source: MGI
  • Ran guanyl-nucleotide exchange factor activity Source: UniProtKB
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
RCC1-like G exchanging factor-like protein
Short name:
RCC1 like
Alternative name(s):
Williams-Beuren syndrome chromosomal region 16 protein homolog
Gene namesi
Name:Rcc1l
Synonyms:Wbscr16
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 5

Organism-specific databases

MGIiMGI:2137600. Wbscr16.

Subcellular locationi

GO - Cellular componenti

  • mitochondrion Source: MGI
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002066571 – 461RCC1-like G exchanging factor-like proteinAdd BLAST461

Proteomic databases

EPDiQ9CYF5.
MaxQBiQ9CYF5.
PaxDbiQ9CYF5.
PRIDEiQ9CYF5.

PTM databases

iPTMnetiQ9CYF5.
PhosphoSitePlusiQ9CYF5.

Expressioni

Gene expression databases

BgeeiENSMUSG00000061979.
ExpressionAtlasiQ9CYF5. baseline and differential.
GenevisibleiQ9CYF5. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000075581.

Structurei

3D structure databases

ProteinModelPortaliQ9CYF5.
SMRiQ9CYF5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati126 – 189RCC1 1Add BLAST64
Repeati190 – 245RCC1 2Add BLAST56
Repeati246 – 298RCC1 3Add BLAST53
Repeati299 – 351RCC1 4Add BLAST53
Repeati352 – 409RCC1 5Add BLAST58
Repeati410 – 459RCC1 6Add BLAST50

Sequence similaritiesi

Contains 6 RCC1 repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG1426. Eukaryota.
COG5184. LUCA.
GeneTreeiENSGT00860000133726.
HOGENOMiHOG000232125.
HOVERGENiHBG054246.
InParanoidiQ9CYF5.
OMAiNVPRCLP.
OrthoDBiEOG091G0A2L.
PhylomeDBiQ9CYF5.
TreeFamiTF317425.

Family and domain databases

Gene3Di2.130.10.30. 1 hit.
InterProiIPR009091. RCC1/BLIP-II.
IPR000408. Reg_chr_condens.
[Graphical view]
PfamiPF00415. RCC1. 3 hits.
[Graphical view]
PRINTSiPR00633. RCCNDNSATION.
SUPFAMiSSF50985. SSF50985. 1 hit.
PROSITEiPS50012. RCC1_3. 6 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9CYF5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAAARALRG PRPRWPTPAR EHWTPAGRSR SRREAAEAEA DVPVFQYVGE
60 70 80 90 100
RAARADRVFV WGFSFSGALG VPSFVVPSSG PGPRAGLRPR RRIQPVPYRL
110 120 130 140 150
ELDHKISSAA CGYGFTLLSS KTKDVTKVWG MGLNKDSQLG FHRSRKDKTR
160 170 180 190 200
GYEYVLEPSP VPLPLDRPQE TKVLQVSCGR AHSLVLTDRE GVFSMGNNSH
210 220 230 240 250
GQCGRKVVED EVYSESHKVH RMQDFDGQVV QVVCGQDHSL FLTDKGEVYS
260 270 280 290 300
CGWGADGQTG LGHYNITSTP SKLGGDLAGV TVVQVATYGD CCLALSADGG
310 320 330 340 350
VFGWGNSEYL QLASVTDSTQ VNVPRCLPFS GVGKVKQVAC GGTGCAVLNA
360 370 380 390 400
EGHVFVWGYG ILGKGPKLLE TAIPEMIPPT LFGLTEFNPE VQVSQIRCGL
410 420 430 440 450
SHFAALTNKG ELFVWGKNIR GCLGIGRLED QYFPWRVTMP GEPVDVACGV
460
DHMVTLAKSF I
Length:461
Mass (Da):49,995
Last modified:June 1, 2001 - v1
Checksum:i52B31CF2D31C2221
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK017733 mRNA. Translation: BAB30902.1.
BC024714 mRNA. Translation: AAH24714.1.
BC055335 mRNA. Translation: AAH55335.1.
CCDSiCCDS19718.1.
RefSeqiNP_291050.1. NM_033572.2.
UniGeneiMm.29508.

Genome annotation databases

EnsembliENSMUST00000076228; ENSMUSP00000075581; ENSMUSG00000061979.
GeneIDi94254.
KEGGimmu:94254.
UCSCiuc008zvc.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK017733 mRNA. Translation: BAB30902.1.
BC024714 mRNA. Translation: AAH24714.1.
BC055335 mRNA. Translation: AAH55335.1.
CCDSiCCDS19718.1.
RefSeqiNP_291050.1. NM_033572.2.
UniGeneiMm.29508.

3D structure databases

ProteinModelPortaliQ9CYF5.
SMRiQ9CYF5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000075581.

PTM databases

iPTMnetiQ9CYF5.
PhosphoSitePlusiQ9CYF5.

Proteomic databases

EPDiQ9CYF5.
MaxQBiQ9CYF5.
PaxDbiQ9CYF5.
PRIDEiQ9CYF5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000076228; ENSMUSP00000075581; ENSMUSG00000061979.
GeneIDi94254.
KEGGimmu:94254.
UCSCiuc008zvc.2. mouse.

Organism-specific databases

CTDi94254.
MGIiMGI:2137600. Wbscr16.

Phylogenomic databases

eggNOGiKOG1426. Eukaryota.
COG5184. LUCA.
GeneTreeiENSGT00860000133726.
HOGENOMiHOG000232125.
HOVERGENiHBG054246.
InParanoidiQ9CYF5.
OMAiNVPRCLP.
OrthoDBiEOG091G0A2L.
PhylomeDBiQ9CYF5.
TreeFamiTF317425.

Miscellaneous databases

PROiQ9CYF5.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000061979.
ExpressionAtlasiQ9CYF5. baseline and differential.
GenevisibleiQ9CYF5. MM.

Family and domain databases

Gene3Di2.130.10.30. 1 hit.
InterProiIPR009091. RCC1/BLIP-II.
IPR000408. Reg_chr_condens.
[Graphical view]
PfamiPF00415. RCC1. 3 hits.
[Graphical view]
PRINTSiPR00633. RCCNDNSATION.
SUPFAMiSSF50985. SSF50985. 1 hit.
PROSITEiPS50012. RCC1_3. 6 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRCC1L_MOUSE
AccessioniPrimary (citable) accession number: Q9CYF5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 10, 2002
Last sequence update: June 1, 2001
Last modified: November 30, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.