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Q9CX98

- CP2U1_MOUSE

UniProt

Q9CX98 - CP2U1_MOUSE

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Protein

Cytochrome P450 2U1

Gene
Cyp2u1
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalyzes the hydroxylation of arachidonic acid, docosahexaenoic acid and other long chain fatty acids. May modulate the arachidonic acid signaling pathway and play a role in other fatty acid signaling processes By similarity.

Catalytic activityi

RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O.

Cofactori

Heme group By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi476 – 4761Iron (heme axial ligand) By similarity

GO - Molecular functioni

  1. aromatase activity Source: UniProtKB-EC
  2. heme binding Source: InterPro
  3. iron ion binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Monooxygenase, Oxidoreductase

Keywords - Ligandi

Heme, Iron, Metal-binding, NADP

Enzyme and pathway databases

ReactomeiREACT_196572. Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE).
REACT_216259. Miscellaneous substrates.

Names & Taxonomyi

Protein namesi
Recommended name:
Cytochrome P450 2U1 (EC:1.14.14.1)
Gene namesi
Name:Cyp2u1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 3

Organism-specific databases

MGIiMGI:1918769. Cyp2u1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei21 – 4121Helical; Reviewed predictionAdd
BLAST
Transmembranei99 – 11921Helical; Reviewed predictionAdd
BLAST
Transmembranei247 – 26721Helical; Reviewed predictionAdd
BLAST
Transmembranei328 – 34821Helical; Reviewed predictionAdd
BLAST
Transmembranei481 – 50121Helical; Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. endoplasmic reticulum membrane Source: UniProtKB-SubCell
  2. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane, Microsome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 530530Cytochrome P450 2U1PRO_0000291757Add
BLAST

Proteomic databases

PRIDEiQ9CX98.

PTM databases

PhosphoSiteiQ9CX98.

Expressioni

Tissue specificityi

Widely expressed.1 Publication

Developmental stagei

Expressed at all stages after E7.1 Publication

Gene expression databases

BgeeiQ9CX98.
GenevestigatoriQ9CX98.

Structurei

3D structure databases

ProteinModelPortaliQ9CX98.
SMRiQ9CX98. Positions 50-530.

Family & Domainsi

Sequence similaritiesi

Belongs to the cytochrome P450 family.

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG2124.
GeneTreeiENSGT00750000117392.
HOGENOMiHOG000036991.
HOVERGENiHBG015789.
InParanoidiQ9CX98.
KOiK07422.
OMAiIEEFAYV.
OrthoDBiEOG7RBZ85.
PhylomeDBiQ9CX98.
TreeFamiTF352043.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiIPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
IPR008069. Cyt_P450_E_grp-I_CYP2D-like.
[Graphical view]
PfamiPF00067. p450. 1 hit.
[Graphical view]
PRINTSiPR00463. EP450I.
PR01686. EP450ICYP2D.
PR00385. P450.
SUPFAMiSSF48264. SSF48264. 1 hit.
PROSITEiPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q9CX98-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MSSLGDQRPA AGEQPGARLH VRATGGALLL CLLAVLLGWV WLRRQRACGI    50
PPGPKPRPLV GNFGHLLVPR FLRPQFWLGS GSQTDTVGQH VYLARMARVY 100
GNIFSFFIGH RLVVVLSDFH SVREALVQQA EVFSDRPRMP LISIMTKEKG 150
IVFAHYGPIW KQQRRFSHST LRHFGLGKLS LEPRIIEEFA YVKEAMQKHG 200
EAPFSPFPII SNAVSNIICS LCFGQRFDYT NKEFKKVLDF MSRGLEICLH 250
SQLFLINICP WFYYLPFGPF KELRQIERDI SCFLKNIIRE HQESLDASNP 300
QDFIDMYLLH MEEEQGASRR SSFDEDYLFY IIGDLFIAGT DTTTNSLLWC 350
LLYMSLNPDV QKKVHEEIER VIGCDRAPSL TDKAQMPYTE ATIMEVQRLS 400
MVVPLAIPHM TSEKTVLQGF TIPKGTVVLI NLWSVHRDPA IWEKPDDFCP 450
HRFLDDQGQL LKRETFIPFG IGKRVCMGEQ LAKMELFLMF VSLMQTFTFA 500
LPEGSEKPVM TGRFGLTLAP HPFNVTISKR 530
Length:530
Mass (Da):60,578
Last modified:June 26, 2007 - v2
Checksum:iFCB595EADA88A213
GO
Isoform 2 (identifier: Q9CX98-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     473-501: KRVCMGEQLAKMELFLMFVSLMQTFTFAL → QLKLGFNLFFTLSLVCVCVCVCVCVYRHV
     502-530: Missing.

Show »
Length:501
Mass (Da):57,321
Checksum:i4A409AA7E463D369
GO
Isoform 3 (identifier: Q9CX98-3) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     236-270: Missing.
     416-416: V → A
     417-530: Missing.

Note: No experimental confirmation available.

Show »
Length:381
Mass (Da):43,367
Checksum:iE9832B9102B2DF99
GO

Sequence cautioni

The sequence AK142740 differs from that shown. Reason: Frameshift at position 245.

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei236 – 27035Missing in isoform 3. VSP_026224Add
BLAST
Alternative sequencei416 – 4161V → A in isoform 3. VSP_026225
Alternative sequencei417 – 530114Missing in isoform 3. VSP_026226Add
BLAST
Alternative sequencei473 – 50129KRVCM…FTFAL → QLKLGFNLFFTLSLVCVCVC VCVCVYRHV in isoform 2. VSP_026227Add
BLAST
Alternative sequencei502 – 53029Missing in isoform 2. VSP_026228Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK018458 mRNA. Translation: BAB31223.1.
AK041477 mRNA. Translation: BAC30954.1.
AK142740 mRNA. No translation available.
CCDSiCCDS51069.1. [Q9CX98-1]
RefSeqiNP_082092.2. NM_027816.3. [Q9CX98-1]
UniGeneiMm.473179.

Genome annotation databases

EnsembliENSMUST00000106337; ENSMUSP00000101944; ENSMUSG00000027983. [Q9CX98-1]
GeneIDi71519.
KEGGimmu:71519.
UCSCiuc008rjn.1. mouse. [Q9CX98-1]
uc008rjo.1. mouse. [Q9CX98-2]
uc008rjp.1. mouse. [Q9CX98-3]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK018458 mRNA. Translation: BAB31223.1 .
AK041477 mRNA. Translation: BAC30954.1 .
AK142740 mRNA. No translation available.
CCDSi CCDS51069.1. [Q9CX98-1 ]
RefSeqi NP_082092.2. NM_027816.3. [Q9CX98-1 ]
UniGenei Mm.473179.

3D structure databases

ProteinModelPortali Q9CX98.
SMRi Q9CX98. Positions 50-530.
ModBasei Search...
MobiDBi Search...

PTM databases

PhosphoSitei Q9CX98.

Proteomic databases

PRIDEi Q9CX98.

Protocols and materials databases

DNASUi 71519.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000106337 ; ENSMUSP00000101944 ; ENSMUSG00000027983 . [Q9CX98-1 ]
GeneIDi 71519.
KEGGi mmu:71519.
UCSCi uc008rjn.1. mouse. [Q9CX98-1 ]
uc008rjo.1. mouse. [Q9CX98-2 ]
uc008rjp.1. mouse. [Q9CX98-3 ]

Organism-specific databases

CTDi 113612.
MGIi MGI:1918769. Cyp2u1.

Phylogenomic databases

eggNOGi COG2124.
GeneTreei ENSGT00750000117392.
HOGENOMi HOG000036991.
HOVERGENi HBG015789.
InParanoidi Q9CX98.
KOi K07422.
OMAi IEEFAYV.
OrthoDBi EOG7RBZ85.
PhylomeDBi Q9CX98.
TreeFami TF352043.

Enzyme and pathway databases

Reactomei REACT_196572. Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE).
REACT_216259. Miscellaneous substrates.

Miscellaneous databases

ChiTaRSi CYP2U1. mouse.
NextBioi 333927.
PROi Q9CX98.
SOURCEi Search...

Gene expression databases

Bgeei Q9CX98.
Genevestigatori Q9CX98.

Family and domain databases

Gene3Di 1.10.630.10. 1 hit.
InterProi IPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
IPR008069. Cyt_P450_E_grp-I_CYP2D-like.
[Graphical view ]
Pfami PF00067. p450. 1 hit.
[Graphical view ]
PRINTSi PR00463. EP450I.
PR01686. EP450ICYP2D.
PR00385. P450.
SUPFAMi SSF48264. SSF48264. 1 hit.
PROSITEi PS00086. CYTOCHROME_P450. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1; 2 AND 3).
    Strain: C57BL/6J.
    Tissue: Heart, Lung and Thymus.
  2. "Expression patterns of mouse and human CYP orthologs (families 1-4) during development and in different adult tissues."
    Choudhary D., Jansson I., Stoilov I., Sarfarazi M., Schenkman J.B.
    Arch. Biochem. Biophys. 436:50-61(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.

Entry informationi

Entry nameiCP2U1_MOUSE
AccessioniPrimary (citable) accession number: Q9CX98
Secondary accession number(s): Q8BIM3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: June 26, 2007
Last modified: September 3, 2014
This is version 109 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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