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Protein

Armadillo repeat-containing X-linked protein 1

Gene

Armcx1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Armadillo repeat-containing X-linked protein 1
Gene namesi
Name:Armcx1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome X

Organism-specific databases

MGIiMGI:1925498. Armcx1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei7 – 2923HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 456456Armadillo repeat-containing X-linked protein 1PRO_0000191362Add
BLAST

Proteomic databases

MaxQBiQ9CX83.
PRIDEiQ9CX83.

PTM databases

PhosphoSiteiQ9CX83.

Expressioni

Gene expression databases

BgeeiQ9CX83.
CleanExiMM_ARMCX1.
GenevisibleiQ9CX83. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000043965.

Structurei

3D structure databases

ProteinModelPortaliQ9CX83.
SMRiQ9CX83. Positions 207-319.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati198 – 23841ARM 1Add
BLAST
Repeati240 – 27940ARM 2Add
BLAST
Repeati361 – 40141ARM 3Add
BLAST

Sequence similaritiesi

Contains 3 ARM repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG45061.
GeneTreeiENSGT00550000074488.
HOGENOMiHOG000231611.
HOVERGENiHBG080349.
InParanoidiQ9CX83.
OMAiHPTRSGA.
OrthoDBiEOG70PBZ0.
PhylomeDBiQ9CX83.
TreeFamiTF335652.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiIPR011989. ARM-like.
IPR006911. ARM-rpt_dom.
IPR016024. ARM-type_fold.
IPR000225. Armadillo.
[Graphical view]
PfamiPF04826. Arm_2. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiPS50176. ARM_REPEAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9CX83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRTREAGCV AAGMVIGAGA CYCVYRLTWG KDENEKLWDE EEEEEEEEEE
60 70 80 90 100
KSCSDKTEKE LKTNVGVGAR GKPQDDSKSK VEVNVGPENG PGVKKEVHPE
110 120 130 140 150
SQSGGGLEAK AKALFKTLKE QARAKAGRGI RLPNISRNRT LTSSLPCPGG
160 170 180 190 200
RGGGCHPGRT GSRARNRTSG KVKRKNRSKS NKAPATAWPV RKGKFSFPYK
210 220 230 240 250
IDDILSAPDL QKVLNILERT NDPFTQEVAL VTLGNNAAYS FNQNAIRELG
260 270 280 290 300
GVPIIAKLIK TRDPIIREKT YNALNNLSVN SENQGKIKTY ISQVCDDTMV
310 320 330 340 350
CRLDSAVQMA GLRLLTNMTV TNHYQHLLSY SFPDFFALLF LGNHFTKIQT
360 370 380 390 400
MKLIINFTEN PAMTRELVSC KVPSELISLF NKEWDREILL NILTLFENIN
410 420 430 440 450
DNIKSEGLAS SRKEFSRSSL FFLFKESGVC VKKIKALASH KDLVVKVKVL

KVLTKL
Length:456
Mass (Da):50,643
Last modified:June 1, 2001 - v1
Checksum:i159EFAEF1B536406
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK019405 mRNA. Translation: BAB31705.1.
AK147002 mRNA. Translation: BAE27599.1.
BC021410 mRNA. Translation: AAH21410.1.
BC026488 mRNA. Translation: AAH26488.1.
BC068228 mRNA. Translation: AAH68228.1.
CCDSiCCDS30398.1.
RefSeqiNP_001159849.1. NM_001166377.1.
NP_001159850.1. NM_001166378.1.
NP_001159851.1. NM_001166379.1.
NP_001159852.1. NM_001166380.1.
NP_084342.1. NM_030066.3.
XP_006528687.1. XM_006528624.1.
XP_006528688.1. XM_006528625.1.
XP_006528689.1. XM_006528626.1.
XP_006528690.1. XM_006528627.1.
UniGeneiMm.458522.

Genome annotation databases

EnsembliENSMUST00000035748; ENSMUSP00000043965; ENSMUSG00000033460.
ENSMUST00000051256; ENSMUSP00000053909; ENSMUSG00000033460.
ENSMUST00000113197; ENSMUSP00000108822; ENSMUSG00000033460.
ENSMUST00000113198; ENSMUSP00000108823; ENSMUSG00000033460.
ENSMUST00000113199; ENSMUSP00000108824; ENSMUSG00000033460.
ENSMUST00000113201; ENSMUSP00000108826; ENSMUSG00000033460.
GeneIDi78248.
KEGGimmu:78248.
UCSCiuc009ugj.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK019405 mRNA. Translation: BAB31705.1.
AK147002 mRNA. Translation: BAE27599.1.
BC021410 mRNA. Translation: AAH21410.1.
BC026488 mRNA. Translation: AAH26488.1.
BC068228 mRNA. Translation: AAH68228.1.
CCDSiCCDS30398.1.
RefSeqiNP_001159849.1. NM_001166377.1.
NP_001159850.1. NM_001166378.1.
NP_001159851.1. NM_001166379.1.
NP_001159852.1. NM_001166380.1.
NP_084342.1. NM_030066.3.
XP_006528687.1. XM_006528624.1.
XP_006528688.1. XM_006528625.1.
XP_006528689.1. XM_006528626.1.
XP_006528690.1. XM_006528627.1.
UniGeneiMm.458522.

3D structure databases

ProteinModelPortaliQ9CX83.
SMRiQ9CX83. Positions 207-319.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000043965.

PTM databases

PhosphoSiteiQ9CX83.

Proteomic databases

MaxQBiQ9CX83.
PRIDEiQ9CX83.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000035748; ENSMUSP00000043965; ENSMUSG00000033460.
ENSMUST00000051256; ENSMUSP00000053909; ENSMUSG00000033460.
ENSMUST00000113197; ENSMUSP00000108822; ENSMUSG00000033460.
ENSMUST00000113198; ENSMUSP00000108823; ENSMUSG00000033460.
ENSMUST00000113199; ENSMUSP00000108824; ENSMUSG00000033460.
ENSMUST00000113201; ENSMUSP00000108826; ENSMUSG00000033460.
GeneIDi78248.
KEGGimmu:78248.
UCSCiuc009ugj.2. mouse.

Organism-specific databases

CTDi51309.
MGIiMGI:1925498. Armcx1.

Phylogenomic databases

eggNOGiNOG45061.
GeneTreeiENSGT00550000074488.
HOGENOMiHOG000231611.
HOVERGENiHBG080349.
InParanoidiQ9CX83.
OMAiHPTRSGA.
OrthoDBiEOG70PBZ0.
PhylomeDBiQ9CX83.
TreeFamiTF335652.

Miscellaneous databases

NextBioi348523.
PROiQ9CX83.
SOURCEiSearch...

Gene expression databases

BgeeiQ9CX83.
CleanExiMM_ARMCX1.
GenevisibleiQ9CX83. MM.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiIPR011989. ARM-like.
IPR006911. ARM-rpt_dom.
IPR016024. ARM-type_fold.
IPR000225. Armadillo.
[Graphical view]
PfamiPF04826. Arm_2. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiPS50176. ARM_REPEAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Head and Heart.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6 and FVB/N-3.
    Tissue: Brain, Eye and Mammary tumor.

Entry informationi

Entry nameiARMX1_MOUSE
AccessioniPrimary (citable) accession number: Q9CX83
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: June 1, 2001
Last modified: July 22, 2015
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.