Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Zinc finger SWIM domain-containing protein 1

Gene

Zswim1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri333 – 37543SWIM-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger SWIM domain-containing protein 1
Gene namesi
Name:Zswim1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1919221. Zswim1.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: MGI
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 455455Zinc finger SWIM domain-containing protein 1PRO_0000223096Add
BLAST

Proteomic databases

MaxQBiQ9CWV7.
PaxDbiQ9CWV7.
PRIDEiQ9CWV7.

PTM databases

PhosphoSiteiQ9CWV7.

Expressioni

Gene expression databases

BgeeiENSMUSG00000017764.
CleanExiMM_ZSWIM1.
ExpressionAtlasiQ9CWV7. baseline and differential.
GenevisibleiQ9CWV7. MM.

Interactioni

Protein-protein interaction databases

MINTiMINT-4084651.

Structurei

3D structure databases

ProteinModelPortaliQ9CWV7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 SWIM-type zinc finger.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri333 – 37543SWIM-typePROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiENOG410IK5N. Eukaryota.
ENOG4111FY6. LUCA.
GeneTreeiENSGT00390000017273.
HOGENOMiHOG000231003.
HOVERGENiHBG099855.
InParanoidiQ9CWV7.
OMAiIWLAHRW.
OrthoDBiEOG091G01A2.
PhylomeDBiQ9CWV7.
TreeFamiTF335703.

Family and domain databases

InterProiIPR007527. Znf_SWIM.
[Graphical view]
PfamiPF04434. SWIM. 1 hit.
[Graphical view]
PROSITEiPS50966. ZF_SWIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9CWV7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALTMLNGLL IKDSSPPMLH QISKTPQLDA FNYQSCFMQD LFAHFPEVLF
60 70 80 90 100
IHRTYNPRGK VLYTFLVDGP RVQVEGPLAR AVYFAIPTNE DARGLAQMFQ
110 120 130 140 150
VFKKFNPAWE RVNTILVDPH FLLLPTLTME FPTAEVLLSA FHICKFLQGK
160 170 180 190 200
FYQLPLEQPV QRLLLSSLQS TMCSATAGNL RKLYTLLNNC IPSSRLPELH
210 220 230 240 250
SHWLLNDRIW LAHRWRSRAQ SSRYFQSLEI MAHILSQFFG TTPFEKQGMA
260 270 280 290 300
SVFRYMQQNS SDKASLSLAE TPQDSHTPSE ASAENPNTEQ LVEARIQHSL
310 320 330 340 350
NAICTGPAAQ LCLGELAVVQ KSMHLIGSGS EKMSIQILED THTVQPQPPA
360 370 380 390 400
SCSCYFNQAF HLPCRHILAM LSARQQVLQP DMLPAQWTSG CASSLDSILG
410 420 430 440 450
SKWSASLDKH LAVTLLTEEV GRLLQHCSEE EFERRYSTLR ELADNWIGPY

EQVQL
Length:455
Mass (Da):51,481
Last modified:June 1, 2001 - v1
Checksum:i201886B814EB9CFF
GO

Sequence cautioni

The sequence AAH25184 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK010358 mRNA. Translation: BAB26878.1.
AL591495 Genomic DNA. Translation: CAM26449.1.
BC025184 mRNA. Translation: AAH25184.1. Different initiation.
BC046831 mRNA. Translation: AAH46831.1.
CCDSiCCDS17059.1.
RefSeqiNP_082304.1. NM_028028.2.
UniGeneiMm.161149.

Genome annotation databases

EnsembliENSMUST00000017908; ENSMUSP00000017908; ENSMUSG00000017764.
GeneIDi71971.
KEGGimmu:71971.
UCSCiuc008nwi.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK010358 mRNA. Translation: BAB26878.1.
AL591495 Genomic DNA. Translation: CAM26449.1.
BC025184 mRNA. Translation: AAH25184.1. Different initiation.
BC046831 mRNA. Translation: AAH46831.1.
CCDSiCCDS17059.1.
RefSeqiNP_082304.1. NM_028028.2.
UniGeneiMm.161149.

3D structure databases

ProteinModelPortaliQ9CWV7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4084651.

PTM databases

PhosphoSiteiQ9CWV7.

Proteomic databases

MaxQBiQ9CWV7.
PaxDbiQ9CWV7.
PRIDEiQ9CWV7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000017908; ENSMUSP00000017908; ENSMUSG00000017764.
GeneIDi71971.
KEGGimmu:71971.
UCSCiuc008nwi.1. mouse.

Organism-specific databases

CTDi90204.
MGIiMGI:1919221. Zswim1.

Phylogenomic databases

eggNOGiENOG410IK5N. Eukaryota.
ENOG4111FY6. LUCA.
GeneTreeiENSGT00390000017273.
HOGENOMiHOG000231003.
HOVERGENiHBG099855.
InParanoidiQ9CWV7.
OMAiIWLAHRW.
OrthoDBiEOG091G01A2.
PhylomeDBiQ9CWV7.
TreeFamiTF335703.

Miscellaneous databases

PROiQ9CWV7.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000017764.
CleanExiMM_ZSWIM1.
ExpressionAtlasiQ9CWV7. baseline and differential.
GenevisibleiQ9CWV7. MM.

Family and domain databases

InterProiIPR007527. Znf_SWIM.
[Graphical view]
PfamiPF04434. SWIM. 1 hit.
[Graphical view]
PROSITEiPS50966. ZF_SWIM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiZSWM1_MOUSE
AccessioniPrimary (citable) accession number: Q9CWV7
Secondary accession number(s): A2A5J3, Q8R163
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 25, 2003
Last sequence update: June 1, 2001
Last modified: September 7, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.