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Q9CV93

- Q9CV93_MOUSE

UniProt

Q9CV93 - Q9CV93_MOUSE

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Protein
Submitted name: Putative uncharacterized protein
Gene
Muc5b
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Muc5bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1921430. Muc5b.

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-KW
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ9CV93.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000081462.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG104074.
InParanoidiQ9CV93.
KOiK13908.

Family and domain databases

InterProiIPR006207. Cys_knot_C.
IPR006208. Glyco_hormone_CN.
IPR002919. TIL_dom.
IPR014853. Unchr_dom_Cys-rich.
IPR001007. VWF_C.
IPR001846. VWF_type-D.
[Graphical view]
PfamiPF08742. C8. 1 hit.
PF00007. Cys_knot. 1 hit.
PF00093. VWC. 1 hit.
PF00094. VWD. 1 hit.
[Graphical view]
SMARTiSM00832. C8. 1 hit.
SM00041. CT. 1 hit.
SM00214. VWC. 2 hits.
SM00216. VWD. 1 hit.
[Graphical view]
SUPFAMiSSF57567. SSF57567. 1 hit.
PROSITEiPS01185. CTCK_1. 1 hit.
PS01225. CTCK_2. 1 hit.
PS01208. VWFC_1. 2 hits.
PS50184. VWFC_2. 2 hits.
PS51233. VWFD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q9CV93-1 [UniParc]FASTAAdd to Basket

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ARCQGNNQII LLEPEPVDNV TCANRHLPIK VWDQEPCHFH YECECFCSGW    50
GHSHYLTFDG TSYTFLDNCT SVLMREIHPR HGNLSILAHS YYCGATTNVT 100
SCPRALSVYY NSMEIILTIS TTESGKDESL IIWDQMWIRS GFSKNGVTVS 150
LSGATTMSVN ISTIGTIITF DGNIFQIWLP YRYFSSNTEG QCGTCTNSQI 200
DDCRRPDGTI ASDCQDMAKE WLVPGNSSSS CLAQPSPLPS TTPQTPVSST 250
LTSTPCPSAP LCELMLSQVF AECHRLIPPD AFFRSCVSDH CNANITDMLC 300
QSLEAYAALC RAQGVCTNWR NATGGLCDLS CPPTKEYRPC GPLHPASCNS 350
RTQDSTTGML AEGCFCPENQ LLFNSRMDIC VSECPCVGPD GLPKFPGEHW 400
ISNCQACVCE PGSVSVQCEP VKCESQDKPP QCTEAGFVTV TWPSADNPCC 450
PETLCVCNST TCPKSLPTCE PGYELVQTHE NSSCCPSYSC RPRLCTYNDT 500
IYGVGTTFPG GPCHTCTCLS DGDQEPKVEC KETNCTTSCP QGFKYTLVPE 550
QCCGECLQNA CLTPEGHAVQ PNETWVNSPV DNCTAYHCMA ENGVYVLTPI 600
PTSCPDVSNC TGTLRKTGCC YSCEKEDSST CQVHVNATVL RYKGCETEVN 650
ITFCEGSCSG ISKYSMEAQA MERQCTCCQE SKVHDVAVTM QCPDGTVIQH 700
TYTHIDECNC APACSSLPGT SMIAS 725
Length:725
Mass (Da):78,873
Last modified:June 1, 2001 - v1
Checksum:iF2D96B2CAB7552E4
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK009011 mRNA. Translation: BAB26024.1.
RefSeqiNP_083077.2. NM_028801.2.
UniGeneiMm.200752.

Genome annotation databases

GeneIDi74180.
KEGGimmu:74180.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK009011 mRNA. Translation: BAB26024.1 .
RefSeqi NP_083077.2. NM_028801.2.
UniGenei Mm.200752.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10090.ENSMUSP00000081462.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 74180.
KEGGi mmu:74180.

Organism-specific databases

CTDi 727897.
MGIi MGI:1921430. Muc5b.

Phylogenomic databases

HOVERGENi HBG104074.
InParanoidi Q9CV93.
KOi K13908.

Miscellaneous databases

NextBioi 340008.
SOURCEi Search...

Gene expression databases

Genevestigatori Q9CV93.

Family and domain databases

InterProi IPR006207. Cys_knot_C.
IPR006208. Glyco_hormone_CN.
IPR002919. TIL_dom.
IPR014853. Unchr_dom_Cys-rich.
IPR001007. VWF_C.
IPR001846. VWF_type-D.
[Graphical view ]
Pfami PF08742. C8. 1 hit.
PF00007. Cys_knot. 1 hit.
PF00093. VWC. 1 hit.
PF00094. VWD. 1 hit.
[Graphical view ]
SMARTi SM00832. C8. 1 hit.
SM00041. CT. 1 hit.
SM00214. VWC. 2 hits.
SM00216. VWD. 1 hit.
[Graphical view ]
SUPFAMi SSF57567. SSF57567. 1 hit.
PROSITEi PS01185. CTCK_1. 1 hit.
PS01225. CTCK_2. 1 hit.
PS01208. VWFC_1. 2 hits.
PS50184. VWFC_2. 2 hits.
PS51233. VWFD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TongueImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TongueImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TongueImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TongueImported.
  5. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TongueImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TongueImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TongueImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TongueImported.

Entry informationi

Entry nameiQ9CV93_MOUSE
AccessioniPrimary (citable) accession number: Q9CV93
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 3, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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