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Q9CV93

- Q9CV93_MOUSE

UniProt

Q9CV93 - Q9CV93_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Muc5b

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 75 (01 Oct 2014)
      Sequence version 1 (01 Jun 2001)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Muc5bImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:1921430. Muc5b.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular region Source: UniProtKB-KW

    Expressioni

    Gene expression databases

    GenevestigatoriQ9CV93.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000081462.

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG104074.
    InParanoidiQ9CV93.
    KOiK13908.

    Family and domain databases

    InterProiIPR006207. Cys_knot_C.
    IPR006208. Glyco_hormone_CN.
    IPR002919. TIL_dom.
    IPR014853. Unchr_dom_Cys-rich.
    IPR001007. VWF_C.
    IPR001846. VWF_type-D.
    [Graphical view]
    PfamiPF08742. C8. 1 hit.
    PF00007. Cys_knot. 1 hit.
    PF00093. VWC. 1 hit.
    PF00094. VWD. 1 hit.
    [Graphical view]
    SMARTiSM00832. C8. 1 hit.
    SM00041. CT. 1 hit.
    SM00214. VWC. 2 hits.
    SM00216. VWD. 1 hit.
    [Graphical view]
    SUPFAMiSSF57567. SSF57567. 1 hit.
    PROSITEiPS01185. CTCK_1. 1 hit.
    PS01225. CTCK_2. 1 hit.
    PS01208. VWFC_1. 2 hits.
    PS50184. VWFC_2. 2 hits.
    PS51233. VWFD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q9CV93-1 [UniParc]FASTAAdd to Basket

    « Hide

    ARCQGNNQII LLEPEPVDNV TCANRHLPIK VWDQEPCHFH YECECFCSGW    50
    GHSHYLTFDG TSYTFLDNCT SVLMREIHPR HGNLSILAHS YYCGATTNVT 100
    SCPRALSVYY NSMEIILTIS TTESGKDESL IIWDQMWIRS GFSKNGVTVS 150
    LSGATTMSVN ISTIGTIITF DGNIFQIWLP YRYFSSNTEG QCGTCTNSQI 200
    DDCRRPDGTI ASDCQDMAKE WLVPGNSSSS CLAQPSPLPS TTPQTPVSST 250
    LTSTPCPSAP LCELMLSQVF AECHRLIPPD AFFRSCVSDH CNANITDMLC 300
    QSLEAYAALC RAQGVCTNWR NATGGLCDLS CPPTKEYRPC GPLHPASCNS 350
    RTQDSTTGML AEGCFCPENQ LLFNSRMDIC VSECPCVGPD GLPKFPGEHW 400
    ISNCQACVCE PGSVSVQCEP VKCESQDKPP QCTEAGFVTV TWPSADNPCC 450
    PETLCVCNST TCPKSLPTCE PGYELVQTHE NSSCCPSYSC RPRLCTYNDT 500
    IYGVGTTFPG GPCHTCTCLS DGDQEPKVEC KETNCTTSCP QGFKYTLVPE 550
    QCCGECLQNA CLTPEGHAVQ PNETWVNSPV DNCTAYHCMA ENGVYVLTPI 600
    PTSCPDVSNC TGTLRKTGCC YSCEKEDSST CQVHVNATVL RYKGCETEVN 650
    ITFCEGSCSG ISKYSMEAQA MERQCTCCQE SKVHDVAVTM QCPDGTVIQH 700
    TYTHIDECNC APACSSLPGT SMIAS 725
    Length:725
    Mass (Da):78,873
    Last modified:June 1, 2001 - v1
    Checksum:iF2D96B2CAB7552E4
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK009011 mRNA. Translation: BAB26024.1.
    RefSeqiNP_083077.2. NM_028801.2.
    UniGeneiMm.200752.

    Genome annotation databases

    GeneIDi74180.
    KEGGimmu:74180.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK009011 mRNA. Translation: BAB26024.1 .
    RefSeqi NP_083077.2. NM_028801.2.
    UniGenei Mm.200752.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000081462.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 74180.
    KEGGi mmu:74180.

    Organism-specific databases

    CTDi 727897.
    MGIi MGI:1921430. Muc5b.

    Phylogenomic databases

    HOVERGENi HBG104074.
    InParanoidi Q9CV93.
    KOi K13908.

    Miscellaneous databases

    NextBioi 340008.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q9CV93.

    Family and domain databases

    InterProi IPR006207. Cys_knot_C.
    IPR006208. Glyco_hormone_CN.
    IPR002919. TIL_dom.
    IPR014853. Unchr_dom_Cys-rich.
    IPR001007. VWF_C.
    IPR001846. VWF_type-D.
    [Graphical view ]
    Pfami PF08742. C8. 1 hit.
    PF00007. Cys_knot. 1 hit.
    PF00093. VWC. 1 hit.
    PF00094. VWD. 1 hit.
    [Graphical view ]
    SMARTi SM00832. C8. 1 hit.
    SM00041. CT. 1 hit.
    SM00214. VWC. 2 hits.
    SM00216. VWD. 1 hit.
    [Graphical view ]
    SUPFAMi SSF57567. SSF57567. 1 hit.
    PROSITEi PS01185. CTCK_1. 1 hit.
    PS01225. CTCK_2. 1 hit.
    PS01208. VWFC_1. 2 hits.
    PS50184. VWFC_2. 2 hits.
    PS51233. VWFD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TongueImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TongueImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TongueImported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TongueImported.
    5. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TongueImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TongueImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TongueImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TongueImported.

    Entry informationi

    Entry nameiQ9CV93_MOUSE
    AccessioniPrimary (citable) accession number: Q9CV93
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2001
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 75 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)