Q9CV93 (Q9CV93_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAB26024.1

Gene names

Name:

Muc5b MGI 1921430

Organism

Mus musculus (Mouse) EMBL BAB26024.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	725 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Cellular component	Secreted SAAS SAAS006208
PTM	Disulfide bond SAAS SAAS006208
Gene Ontology (GO)
Cellular_component	extracellular region Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAB26024.1

Sequences

	Sequence		Length	Mass (Da)
	Q9CV93 [UniParc]. Last modified June 1, 2001. Version 1. Checksum: F2D96B2CAB7552E4	FASTA	725	78,873
	10 20 30 40 50 60 ARCQGNNQII LLEPEPVDNV TCANRHLPIK VWDQEPCHFH YECECFCSGW GHSHYLTFDG 70 80 90 100 110 120 TSYTFLDNCT SVLMREIHPR HGNLSILAHS YYCGATTNVT SCPRALSVYY NSMEIILTIS 130 140 150 160 170 180 TTESGKDESL IIWDQMWIRS GFSKNGVTVS LSGATTMSVN ISTIGTIITF DGNIFQIWLP 190 200 210 220 230 240 YRYFSSNTEG QCGTCTNSQI DDCRRPDGTI ASDCQDMAKE WLVPGNSSSS CLAQPSPLPS 250 260 270 280 290 300 TTPQTPVSST LTSTPCPSAP LCELMLSQVF AECHRLIPPD AFFRSCVSDH CNANITDMLC 310 320 330 340 350 360 QSLEAYAALC RAQGVCTNWR NATGGLCDLS CPPTKEYRPC GPLHPASCNS RTQDSTTGML 370 380 390 400 410 420 AEGCFCPENQ LLFNSRMDIC VSECPCVGPD GLPKFPGEHW ISNCQACVCE PGSVSVQCEP 430 440 450 460 470 480 VKCESQDKPP QCTEAGFVTV TWPSADNPCC PETLCVCNST TCPKSLPTCE PGYELVQTHE 490 500 510 520 530 540 NSSCCPSYSC RPRLCTYNDT IYGVGTTFPG GPCHTCTCLS DGDQEPKVEC KETNCTTSCP 550 560 570 580 590 600 QGFKYTLVPE QCCGECLQNA CLTPEGHAVQ PNETWVNSPV DNCTAYHCMA ENGVYVLTPI 610 620 630 640 650 660 PTSCPDVSNC TGTLRKTGCC YSCEKEDSST CQVHVNATVL RYKGCETEVN ITFCEGSCSG 670 680 690 700 710 720 ISKYSMEAQA MERQCTCCQE SKVHDVAVTM QCPDGTVIQH TYTHIDECNC APACSSLPGT SMIAS

References

[1]	"High-efficiency full-length cDNA cloning." Carninci P., Hayashizaki Y. Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAB26024.1. Tissue: Tongue EMBL BAB26024.1.
[2]	"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes." Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y. Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAB26024.1. Tissue: Tongue EMBL BAB26024.1.
[3]	"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer." Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y. Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAB26024.1. Tissue: Tongue EMBL BAB26024.1.
[4]	Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H., Arakawa T., Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M., Hanagaki T., Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F. , Imotani K., Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H., Kawai J., Kojima Y., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., Nishi K., Nomura K., Numazaki R., Ohno M., Okazaki Y., Okido T., Owa C., Saito H., Saito R., Sakai C., Sakai K., Sano H., Sasaki D., Shibata K., Shibata Y., Shinagawa A., Shiraki T., Sogabe Y., Suzuki H., Tagami M., Tagawa A., Takahashi F., Tanaka T., Tejima Y., Toya T., Yamamura T., Yasunishi A., Yoshida K., Yoshino M., Muramatsu M., Hayashizaki Y. Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAB26024.1. Tissue: Tongue EMBL BAB26024.1.
[5]	"Functional annotation of a full-length mouse cDNA collection." The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Nature 409:685-690(2001) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAB26024.1. Tissue: Tongue EMBL BAB26024.1.
[6]	"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs." The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team Nature 420:563-573(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAB26024.1. Tissue: Tongue EMBL BAB26024.1.
[7]	"The Transcriptional Landscape of the Mammalian Genome." The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science 309:1559-1563(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAB26024.1. Tissue: Tongue EMBL BAB26024.1.
[8]	"Antisense Transcription in the Mammalian Transcriptome." RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAB26024.1. Tissue: Tongue EMBL BAB26024.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK009011 mRNA. Translation: BAB26024.1.
IPI	IPI00989487.
RefSeq	NP_083077.2. NM_028801.2.
UniGene	Mm.200752.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	10090.ENSMUSP00000081462.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	74180.
KEGG	mmu:74180.
Organism-specific databases
CTD	727897.
MGI	MGI:1921430. Muc5b.
Phylogenomic databases
HOVERGEN	HBG104074.
InParanoid	Q9CV93.
KO	K13908.
Gene expression databases
Genevestigator	Q9CV93.
Family and domain databases
InterPro	IPR006208. Cys_knot. IPR006207. Cys_knot_C. IPR002919. TIL_dom. IPR014853. Unchr_dom_Cys-rich. IPR001007. VWF_C. IPR001846. VWF_type-D. [Graphical view]
Pfam	PF08742. C8. 1 hit. PF00007. Cys_knot. 1 hit. PF00093. VWC. 1 hit. PF00094. VWD. 1 hit. [Graphical view]
SMART	SM00832. C8. 1 hit. SM00041. CT. 1 hit. SM00214. VWC. 2 hits. SM00216. VWD. 1 hit. [Graphical view]
SUPFAM	SSF57567. Cysrich_TIL. 1 hit.
PROSITE	PS01185. CTCK_1. 1 hit. PS01225. CTCK_2. 1 hit. PS01208. VWFC_1. 2 hits. PS50184. VWFC_2. 2 hits. PS51233. VWFD. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	340008.
SOURCE	Search...

Entry information

Entry name

Q9CV93_MOUSE

Accession

Primary (citable) accession number: Q9CV93

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2001
Last sequence update:	June 1, 2001
Last modified:	April 3, 2013
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)