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Protein
Submitted name:

Putative uncharacterized protein

Gene

Pkd1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. branching morphogenesis of an epithelial tube Source: Ensembl
  2. cartilage development Source: Ensembl
  3. digestive tract development Source: Ensembl
  4. genitalia development Source: Ensembl
  5. heart development Source: Ensembl
  6. lung epithelium development Source: Ensembl
  7. mesonephric duct development Source: Ensembl
  8. metanephric ascending thin limb development Source: Ensembl
  9. metanephric collecting duct development Source: Ensembl
  10. metanephric distal tubule morphogenesis Source: Ensembl
  11. metanephric proximal tubule development Source: Ensembl
  12. neural tube development Source: Ensembl
  13. positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle Source: Ensembl
  14. positive regulation of cytosolic calcium ion concentration Source: Ensembl
  15. positive regulation of transcription from RNA polymerase II promoter Source: Ensembl
  16. regulation of proteasomal protein catabolic process Source: Ensembl
  17. skin development Source: Ensembl
  18. spinal cord development Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Pkd1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:97603. Pkd1.

Subcellular locationi

GO - Cellular componenti

  1. basolateral plasma membrane Source: Ensembl
  2. extracellular vesicular exosome Source: Ensembl
  3. Golgi apparatus Source: Ensembl
  4. lateral plasma membrane Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiQ9CUT4.
ExpressionAtlasiQ9CUT4. baseline and differential.
GenevestigatoriQ9CUT4.

Sequencei

Sequence statusi: Fragment.

Q9CUT4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ALRVWGALRL GAILLRWRYH ALRGELYRPA WEPQDYEMVE LFLRRLRLWM
60 70 80 90 100
GFSKVKEFRH KVRFEGMDPL PSRSSRGSKS SPVVLPPSSG SEASHPSTSS
110 120 130 140 150
SQPDGPSASL SRSTLKLEPE PSRLHAVFES LLVQFDRLNQ ATEDVYQLEQ
160 170 180 190 200
QLQSLQGHGH NGPPSSPSPG CFPGSQPALP SRLSRASQGL DQTVGPNRVS
210
LWPNNKVHPS ST
Length:212
Mass (Da):23,598
Last modified:May 31, 2001 - v1
Checksum:iA8A993C2B65B6140
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK014622 mRNA. Translation: BAB29468.1.
UniGeneiMm.290442.
Mm.30435.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK014622 mRNA. Translation: BAB29468.1.
UniGeneiMm.290442.
Mm.30435.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:97603. Pkd1.

Miscellaneous databases

ChiTaRSiPkd1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiQ9CUT4.
ExpressionAtlasiQ9CUT4. baseline and differential.
GenevestigatoriQ9CUT4.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  5. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2000)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2004)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.

Entry informationi

Entry nameiQ9CUT4_MOUSE
AccessioniPrimary (citable) accession number: Q9CUT4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2001
Last sequence update: May 31, 2001
Last modified: March 31, 2015
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.