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Q9CUM4 (Q9CUM4_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Dnm2 MGI 109547
OrganismMus musculus (Mouse) EMBL BAB29835.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length493 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the dynamin family. RuleBase RU003932

Ontologies

Keywords
   LigandGTP-binding RuleBase RU003932 SAAS SAAS019762
Nucleotide-binding
Gene Ontology (GO)
   Biological_processendocytosis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmicrotubule

Inferred from electronic annotation. Source: InterPro

   Molecular_functionGTP binding

Inferred from electronic annotation. Source: UniProtKB-KW

GTPase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAB29835.1

Sequences

Sequence LengthMass (Da)Tools
Q9CUM4 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: 7A359201900939AB

FASTA49356,552
        10         20         30         40         50         60 
NFVGRDFLPR GSGIVTRRPL ILQLIFSKTE YAEFLHCKSK KFTDFDEVRQ EIEAETDRVT 

        70         80         90        100        110        120 
GTNKGISPVP INLRVYSPHV LNLTLIDLPG ITKVPVGDQP PDIEYQIKDM ILQFISRESS 

       130        140        150        160        170        180 
LILAVTPANM DLANSDALKL AKEVDPQGLR TIGVITKLDL MDEGTDARDD LENKLLPLRR 

       190        200        210        220        230        240 
GYIGVVNRSQ KDIEGKKDIR AALAAERKFF LSHPAYRHMA DRMGTPHLQK TLNQQLTNHI 

       250        260        270        280        290        300 
RESLPTLRSK LQSQLLSLEK EVEEYKNFRP DDPTRKTKAL LQMVQQFGVD FEKRIEGSGD 

       310        320        330        340        350        360 
QVDTLELSGG ARINRIFHER FPFELVKMEF DEKDLRREIS YAIKNIHGVR TGLFTPDMAF 

       370        380        390        400        410        420 
EAIVKKQLVK LKEPSLKCVD LVVSELATVI KKCAEKLSSY PRLREETERI VTTYIREREG 

       430        440        450        460        470        480 
RTKDQILLLI DIEQSYINTN HEDFIGFANA QQRSTQLNKK RAIPNQGEIL TSLTDQTMAY 

       490 
HMRRFAFLCL WQA 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAB29835.1.
Tissue: Testis EMBL BAB29835.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAB29835.1.
Tissue: Testis EMBL BAB29835.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAB29835.1.
Tissue: Testis EMBL BAB29835.1.
[4]Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H., Arakawa T., Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M., Hanagaki T., Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F. expand/collapse author list , Imotani K., Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H., Kawai J., Kojima Y., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., Nishi K., Nomura K., Numazaki R., Ohno M., Okazaki Y., Okido T., Owa C., Saito H., Saito R., Sakai C., Sakai K., Sano H., Sasaki D., Shibata K., Shibata Y., Shinagawa A., Shiraki T., Sogabe Y., Suzuki H., Tagami M., Tagawa A., Takahashi F., Tanaka T., Tejima Y., Toya T., Yamamura T., Yasunishi A., Yoshida K., Yoshino M., Muramatsu M., Hayashizaki Y.
Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAB29835.1.
Tissue: Testis EMBL BAB29835.1.
[5]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAB29835.1.
Tissue: Testis EMBL BAB29835.1.
[6]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAB29835.1.
Tissue: Testis EMBL BAB29835.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAB29835.1.
Tissue: Testis EMBL BAB29835.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAB29835.1.
Tissue: Testis EMBL BAB29835.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK015410 mRNA. Translation: BAB29835.1.
UniGeneMm.433257.

3D structure databases

ProteinModelPortalQ9CUM4.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ9CUM4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:109547. Dnm2.

Phylogenomic databases

HOVERGENHBG107833.

Gene expression databases

GenevestigatorQ9CUM4.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
InterProIPR027188. DNM2.
IPR000375. Dynamin_central.
IPR001401. Dynamin_GTPase.
IPR019762. Dynamin_GTPase_CS.
IPR022812. Dynamin_SF.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERPTHR11566. PTHR11566. 1 hit.
PTHR11566:SF23. PTHR11566:SF23. 1 hit.
PfamPF01031. Dynamin_M. 1 hit.
PF00350. Dynamin_N. 1 hit.
[Graphical view]
PRINTSPR00195. DYNAMIN.
SMARTSM00053. DYNc. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00410. DYNAMIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSDNM2. mouse.
SOURCESearch...

Entry information

Entry nameQ9CUM4_MOUSE
AccessionPrimary (citable) accession number: Q9CUM4
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: April 16, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)