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Q9CTL2

- Q9CTL2_MOUSE

UniProt

Q9CTL2 - Q9CTL2_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Lmna

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 4 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Molecular functioni

    1. protein binding Source: MGI
    2. structural molecule activity Source: InterPro

    GO - Biological processi

    1. negative regulation of extrinsic apoptotic signaling pathway Source: MGI
    2. negative regulation of release of cytochrome c from mitochondria Source: MGI
    3. nuclear envelope organization Source: MGI
    4. nucleus organization Source: MGI
    5. protein localization to nucleus Source: MGI
    6. regulation of protein localization to nucleus Source: MGI
    7. sterol regulatory element binding protein import into nucleus Source: MGI
    8. ventricular cardiac muscle cell development Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:LmnaImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:96794. Lmna.

    Subcellular locationi

    GO - Cellular componenti

    1. lamin filament Source: MGI
    2. nuclear envelope Source: MGI
    3. nucleus Source: MGI

    Expressioni

    Gene expression databases

    ArrayExpressiQ9CTL2.
    BgeeiQ9CTL2.
    GenevestigatoriQ9CTL2.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9CTL2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000007711.

    Family and domain databases

    Gene3Di2.60.40.1260. 1 hit.
    InterProiIPR001664. IF.
    IPR001322. Lamin_tail_dom.
    [Graphical view]
    PANTHERiPTHR23239. PTHR23239. 1 hit.
    PfamiPF00932. LTD. 1 hit.
    [Graphical view]
    SUPFAMiSSF74853. SSF74853. 1 hit.

    Sequencei

    Sequence statusi: Fragment.

    Q9CTL2-1 [UniParc]FASTAAdd to Basket

    « Hide

    QIRRQNGDDP LMTYRFPPKF TLKAGQVVTI WASGAGATHS PPTDLVWKAQ    50
    NTWGCGSSLR TALINSTGEE VAMRKLVRSL TMVEDNEDDD EDGEELLHHH 100
    RVSGSRR 107
    Length:107
    Mass (Da):11,946
    Last modified:June 1, 2001 - v1
    Checksum:i690138D344CE4A06
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK003174 mRNA. Translation: BAB22619.1.
    UniGeneiMm.243014.
    Mm.471227.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK003174 mRNA. Translation: BAB22619.1 .
    UniGenei Mm.243014.
    Mm.471227.

    3D structure databases

    ProteinModelPortali Q9CTL2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:96794. Lmna.

    Phylogenomic databases

    HOGENOMi HOG000007711.

    Miscellaneous databases

    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q9CTL2.
    Bgeei Q9CTL2.
    Genevestigatori Q9CTL2.

    Family and domain databases

    Gene3Di 2.60.40.1260. 1 hit.
    InterProi IPR001664. IF.
    IPR001322. Lamin_tail_dom.
    [Graphical view ]
    PANTHERi PTHR23239. PTHR23239. 1 hit.
    Pfami PF00932. LTD. 1 hit.
    [Graphical view ]
    SUPFAMi SSF74853. SSF74853. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    5. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.

    Entry informationi

    Entry nameiQ9CTL2_MOUSE
    AccessioniPrimary (citable) accession number: Q9CTL2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2001
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)