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Q9CT40

- Q9CT40_MOUSE

UniProt

Q9CT40 - Q9CT40_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Rb1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 5 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 3 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding Source: MGI

    GO - Biological processi

    1. cell cycle arrest Source: MGI
    2. cell division Source: MGI
    3. cell morphogenesis involved in neuron differentiation Source: MGI
    4. digestive tract development Source: MGI
    5. enucleate erythrocyte differentiation Source: MGI
    6. G1/S transition of mitotic cell cycle Source: MGI
    7. glial cell apoptotic process Source: MGI
    8. hepatocyte apoptotic process Source: MGI
    9. negative regulation of cell cycle Source: MGI
    10. negative regulation of cell proliferation Source: MGI
    11. negative regulation of epithelial cell proliferation Source: MGI
    12. negative regulation of G1/S transition of mitotic cell cycle Source: MGI
    13. negative regulation of smoothened signaling pathway Source: MGI
    14. negative regulation of transcription, DNA-templated Source: MGI
    15. negative regulation of transcription from RNA polymerase II promoter Source: MGI
    16. neuron apoptotic process Source: MGI
    17. neuron differentiation Source: MGI
    18. neuron maturation Source: MGI
    19. neuron projection development Source: MGI
    20. positive regulation of macrophage differentiation Source: MGI
    21. positive regulation of transcription from RNA polymerase II promoter Source: MGI
    22. regulation of cell cycle Source: MGI
    23. skeletal muscle cell differentiation Source: MGI
    24. striated muscle cell differentiation Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Rb1Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:97874. Rb1.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: MGI
    2. spindle Source: MGI
    3. transcription factor complex Source: MGI

    Expressioni

    Gene expression databases

    GenevestigatoriQ9CT40.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000022701.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9CT40.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    InParanoidiQ9CT40.

    Family and domain databases

    InterProiIPR002720. RB_A.
    IPR028309. RB_fam.
    IPR024599. RB_N.
    [Graphical view]
    PANTHERiPTHR13742. PTHR13742. 1 hit.
    PfamiPF11934. DUF3452. 1 hit.
    PF01858. RB_A. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q9CT40-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPPKAPRRAA AAEPPPPPPP PPREDDPAQD SGPEELPLAR LEFEEIEEPE    50
    FIALCQKLKV PDHVRERAWL TWEKVSSVDG ILEGYIQKKK ELWGICIFIA 100
    AVDLDEMPFT FTELQKSIET SVYKFFDLLK EIDTSTKVDN AMSRLLKKYN 150
    VLCALYSKLE RTCELIYLTQ PSSALSTEIN SMLVLKISWI TFLLAKGEVL 200
    QMEDDLVISF QLMLCVVDYF IKFSPPALLR EPYKTAALPI NGSPRTPRRG 250
    QNRSARIAKQ LENDTRIIEV LCKEHECNID EVKNVYFKNF IPFINSLGIV 300
    SSNGLPEVES LSKRYEEVYL KNKDLDARLF LDHDKTLQTD PIDSFETERT 350
    PRKNNPDEEA NVVTPHTPVR TVMNTIQQLM VILNSASDQP SENLISYFNN 400
    CTVNP 405
    Length:405
    Mass (Da):46,221
    Last modified:October 11, 2005 - v3
    Checksum:iC18B6F9A0565B88C
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei405 – 4051Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK011246 mRNA. Translation: BAB27493.3.
    UniGeneiMm.273862.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK011246 mRNA. Translation: BAB27493.3 .
    UniGenei Mm.273862.

    3D structure databases

    ProteinModelPortali Q9CT40.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000022701.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:97874. Rb1.

    Phylogenomic databases

    InParanoidi Q9CT40.

    Miscellaneous databases

    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q9CT40.

    Family and domain databases

    InterProi IPR002720. RB_A.
    IPR028309. RB_fam.
    IPR024599. RB_N.
    [Graphical view ]
    PANTHERi PTHR13742. PTHR13742. 1 hit.
    Pfami PF11934. DUF3452. 1 hit.
    PF01858. RB_A. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    5. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Whole bodyImported.

    Entry informationi

    Entry nameiQ9CT40_MOUSE
    AccessioniPrimary (citable) accession number: Q9CT40
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2001
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 78 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)