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Protein

60S ribosomal protein L27

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L27UniRule annotation
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ9CSM4.
PeptideAtlasiQ9CSM4.
PRIDEiQ9CSM4.

Expressioni

Gene expression databases

BgeeiENSMUSG00000063316.

Interactioni

Protein-protein interaction databases

IntActiQ9CSM4. 2 interactors.
MINTiMINT-4125229.
STRINGi10090.ENSMUSP00000095287.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L27e family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3418. Eukaryota.
COG2163. LUCA.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR10497. PTHR10497. 1 hit.
PfamiPF01777. Ribosomal_L27e. 1 hit.
[Graphical view]
ProDomiPD009396. Ribosomal_L27e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01107. RIBOSOMAL_L27E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q9CSM4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KVTAAMGKKK IAKRSKIKSF VKVYNYNHLM PTRYSVDIPL DKTVVNKDVF
60 70 80
RDPALKRKAR REAKVKFEER YKTGKNKWFF QKLRF
Length:85
Mass (Da):10,211
Last modified:June 1, 2001 - v1
Checksum:i77EE8CD8F0D67A00
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK012441 mRNA. Translation: BAB28240.1.
UniGeneiMm.340658.
Mm.439813.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK012441 mRNA. Translation: BAB28240.1.
UniGeneiMm.340658.
Mm.439813.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9CSM4. 2 interactors.
MINTiMINT-4125229.
STRINGi10090.ENSMUSP00000095287.

Proteomic databases

PaxDbiQ9CSM4.
PeptideAtlasiQ9CSM4.
PRIDEiQ9CSM4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG3418. Eukaryota.
COG2163. LUCA.

Gene expression databases

BgeeiENSMUSG00000063316.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR10497. PTHR10497. 1 hit.
PfamiPF01777. Ribosomal_L27e. 1 hit.
[Graphical view]
ProDomiPD009396. Ribosomal_L27e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01107. RIBOSOMAL_L27E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9CSM4_MOUSE
AccessioniPrimary (citable) accession number: Q9CSM4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: November 2, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.