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Protein
Submitted name:

Uncharacterized protein

Gene

Upf3b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Upf3bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1915384. Upf3b.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini50 – 208Smg4_UPF3InterPro annotationAdd BLAST159

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili200 – 232Sequence analysisAdd BLAST33

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1295. Eukaryota.
ENOG41122XD. LUCA.
HOVERGENiHBG059714.

Family and domain databases

CDDicd12728. RRM_like_Smg4_UPF3B. 1 hit.
InterProiView protein in InterPro
IPR000504. RRM_dom.
IPR005120. UPF3_dom.
IPR034979. UPF3B_RRM-like.
PfamiView protein in Pfam
PF03467. Smg4_UPF3. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q9CS15-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKEEKDHRPK EKRVTLFTPQ GATGGCIGAT AEGAKGDDRQ DRNRDKKEAL
60 70 80 90 100
SKVVIRRLPP TLTKEQLQEH LQPMPEHDYF EFFSNDTSLY PHMYARAYIN
110 120 130 140 150
FKNQEDILLF RDRFDGYVFL DNKGQEYHAI VEFAPFQKAA KKKIKKRDTK
160 170 180 190 200
VGTIEDDPEY RKFLESYATD NEKMTSTPET LLEEIEAKNR ELIAKRTTPL
210 220 230
LSFLKNKQRM REEKREERRR REIERKRQRE EE
Length:232
Mass (Da):27,675
Last modified:June 1, 2001 - v1
Checksum:i5DF971342EB5120B
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei232Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK019989 mRNA. Translation: BAB31954.1.
AK162222 mRNA. Translation: BAE36799.1.
UniGeneiMm.271160.

Similar proteinsi

Entry informationi

Entry nameiQ9CS15_MOUSE
AccessioniPrimary (citable) accession number: Q9CS15
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 27, 2017
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)