UniProtKB - Q9CQL4 (RM20_MOUSE)
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Protein
39S ribosomal protein L20, mitochondrial
Gene
Mrpl20
Organism
Mus musculus (Mouse)
Status
Functioni
GO - Molecular functioni
- rRNA binding Source: InterPro
- structural constituent of ribosome Source: MGI
GO - Biological processi
- ribosomal large subunit assembly Source: GO_Central
- translation Source: MGI
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein |
Enzyme and pathway databases
Reactomei | R-MMU-5389840. Mitochondrial translation elongation. R-MMU-5419276. Mitochondrial translation termination. |
Names & Taxonomyi
Protein namesi | Recommended name: 39S ribosomal protein L20, mitochondrialShort name: L20mt Short name: MRP-L20 |
Gene namesi | Name:Mrpl20 |
Organismi | Mus musculus (Mouse) |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:2137221. Mrpl20. |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transit peptidei | 1 – 9 | MitochondrionBy similarity | 9 | |
ChainiPRO_0000248280 | 10 – 149 | 39S ribosomal protein L20, mitochondrialAdd BLAST | 140 |
Proteomic databases
EPDi | Q9CQL4. |
MaxQBi | Q9CQL4. |
PaxDbi | Q9CQL4. |
PeptideAtlasi | Q9CQL4. |
PRIDEi | Q9CQL4. |
PTM databases
iPTMneti | Q9CQL4. |
PhosphoSitePlusi | Q9CQL4. |
Expressioni
Gene expression databases
Bgeei | ENSMUSG00000029066. |
CleanExi | MM_MRPL20. |
ExpressionAtlasi | Q9CQL4. baseline and differential. |
Genevisiblei | Q9CQL4. MM. |
Interactioni
Subunit structurei
Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins (By similarity). Interacts with OXA1L (By similarity).By similarity
Protein-protein interaction databases
BioGridi | 211482. 1 interactor. |
STRINGi | 10090.ENSMUSP00000030942. |
Structurei
3D structure databases
ProteinModelPortali | Q9CQL4. |
SMRi | Q9CQL4. |
ModBasei | Search... |
MobiDBi | Search... |
Family & Domainsi
Sequence similaritiesi
Belongs to the bacterial ribosomal protein bL20 family.Curated
Keywords - Domaini
Transit peptidePhylogenomic databases
eggNOGi | KOG4707. Eukaryota. COG0292. LUCA. |
GeneTreei | ENSGT00390000015823. |
HOGENOMi | HOG000035046. |
HOVERGENi | HBG058971. |
InParanoidi | Q9CQL4. |
KOi | K02887. |
OMAi | DLAMNHP. |
OrthoDBi | EOG091G0M7Y. |
PhylomeDBi | Q9CQL4. |
TreeFami | TF324702. |
Family and domain databases
CDDi | cd07026. Ribosomal_L20. 1 hit. |
Gene3Di | 1.10.1900.20. 1 hit. |
InterProi | View protein in InterPro IPR005813. Ribosomal_L20. IPR035566. Ribosomal_protein_L20_C. |
PANTHERi | PTHR10986. PTHR10986. 1 hit. |
Pfami | View protein in Pfam PF00453. Ribosomal_L20. 1 hit. |
PRINTSi | PR00062. RIBOSOMALL20. |
SUPFAMi | SSF74731. SSF74731. 1 hit. |
TIGRFAMsi | TIGR01032. rplT_bact. 1 hit. |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
Q9CQL4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MVFLTTRLWL RNRLTDRYWR VQEVLKHAQH FRGRKNRCYR LAVRAVTRAF
60 70 80 90 100
VKCTKARRLK KRNLRTLWIN RITAASQEHG LKYPAFIVNL IKCQVELNRK
110 120 130 140
VLVDLAIYEP KTFKSLAALA KRRQQEGFAA ALGDGKEPEG IFSRVVQYH
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 62 | R → L in BAB29744 (PubMed:16141072).Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB049645 mRNA. Translation: BAB40850.1. AK004053 mRNA. Translation: BAB23143.1. AK011341 mRNA. Translation: BAB27555.1. AK015199 mRNA. Translation: BAB29744.1. AK168665 mRNA. Translation: BAE40517.1. BC039985 mRNA. Translation: AAH39985.1. |
CCDSi | CCDS19041.1. |
RefSeqi | NP_079846.1. NM_025570.2. XP_006539167.1. XM_006539104.2. |
UniGenei | Mm.23825. Mm.332146. |
Genome annotation databases
Ensembli | ENSMUST00000030942; ENSMUSP00000030942; ENSMUSG00000029066. ENSMUST00000137487; ENSMUSP00000139122; ENSMUSG00000029066. |
GeneIDi | 66448. |
KEGGi | mmu:66448. |
UCSCi | uc008weu.1. mouse. |
Similar proteinsi
Entry informationi
Entry namei | RM20_MOUSE | |
Accessioni | Q9CQL4Primary (citable) accession number: Q9CQL4 Secondary accession number(s): Q9D5L3 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | September 5, 2006 |
Last sequence update: | June 1, 2001 | |
Last modified: | February 28, 2018 | |
This is version 128 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |