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Protein

PDZK1-interacting protein 1

Gene

Pdzk1ip1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
PDZK1-interacting protein 1
Alternative name(s):
17 kDa membrane-associated protein
Gene namesi
Name:Pdzk1ip1
Synonyms:Map17
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:1914432. Pdzk1ip1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei30 – 5021HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 114114PDZK1-interacting protein 1PRO_0000058283Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei85 – 851PhosphoserineCombined sources

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ9CQH0.
PaxDbiQ9CQH0.
PRIDEiQ9CQH0.

PTM databases

iPTMnetiQ9CQH0.
PhosphoSiteiQ9CQH0.

Expressioni

Gene expression databases

BgeeiQ9CQH0.
CleanExiMM_PDZK1IP1.
ExpressionAtlasiQ9CQH0. baseline and differential.
GenevisibleiQ9CQH0. MM.

Interactioni

Subunit structurei

Interacts with PDZK1.By similarity

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410J305. Eukaryota.
ENOG41116TZ. LUCA.
GeneTreeiENSGT00390000014478.
HOGENOMiHOG000231172.
HOVERGENiHBG080155.
InParanoidiQ9CQH0.
OrthoDBiEOG7CNZJ7.
PhylomeDBiQ9CQH0.
TreeFamiTF328829.

Family and domain databases

InterProiIPR026628. PDZK-int_prot1.
IPR031627. PDZK1IP1/SMIM24.
[Graphical view]
PANTHERiPTHR15296:SF0. PTHR15296:SF0. 1 hit.
PfamiPF15807. MAP17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9CQH0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAFSLLVLG LLAEVAPASC QQGLGNLQPW MQGLIAVAVF LVLVAIVFAV
60 70 80 90 100
NHFWCQEEPE PGSTVMIIGN KADGVLVGMD GRYSSMASGF RSSEHKNAYE
110
NVLEEEGRVR STPM
Length:114
Mass (Da):12,298
Last modified:June 1, 2001 - v1
Checksum:i8DF7CF00E26A0BDC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK007936 mRNA. Translation: BAB25361.1.
AK008253 mRNA. Translation: BAB25559.1.
AK012305 mRNA. Translation: BAB28152.1.
BC013542 mRNA. Translation: AAH13542.1.
CCDSiCCDS18487.1.
RefSeqiNP_001158029.1. NM_001164557.1.
NP_001158030.1. NM_001164558.1.
NP_080294.1. NM_026018.3.
UniGeneiMm.30181.

Genome annotation databases

EnsembliENSMUST00000030488; ENSMUSP00000030488; ENSMUSG00000028716.
ENSMUST00000106548; ENSMUSP00000102158; ENSMUSG00000028716.
ENSMUST00000177647; ENSMUSP00000136049; ENSMUSG00000028716.
GeneIDi67182.
KEGGimmu:67182.
UCSCiuc008ueo.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK007936 mRNA. Translation: BAB25361.1.
AK008253 mRNA. Translation: BAB25559.1.
AK012305 mRNA. Translation: BAB28152.1.
BC013542 mRNA. Translation: AAH13542.1.
CCDSiCCDS18487.1.
RefSeqiNP_001158029.1. NM_001164557.1.
NP_001158030.1. NM_001164558.1.
NP_080294.1. NM_026018.3.
UniGeneiMm.30181.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

PTM databases

iPTMnetiQ9CQH0.
PhosphoSiteiQ9CQH0.

Proteomic databases

MaxQBiQ9CQH0.
PaxDbiQ9CQH0.
PRIDEiQ9CQH0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000030488; ENSMUSP00000030488; ENSMUSG00000028716.
ENSMUST00000106548; ENSMUSP00000102158; ENSMUSG00000028716.
ENSMUST00000177647; ENSMUSP00000136049; ENSMUSG00000028716.
GeneIDi67182.
KEGGimmu:67182.
UCSCiuc008ueo.2. mouse.

Organism-specific databases

CTDi10158.
MGIiMGI:1914432. Pdzk1ip1.

Phylogenomic databases

eggNOGiENOG410J305. Eukaryota.
ENOG41116TZ. LUCA.
GeneTreeiENSGT00390000014478.
HOGENOMiHOG000231172.
HOVERGENiHBG080155.
InParanoidiQ9CQH0.
OrthoDBiEOG7CNZJ7.
PhylomeDBiQ9CQH0.
TreeFamiTF328829.

Miscellaneous databases

ChiTaRSiPdzk1ip1. mouse.
PROiQ9CQH0.
SOURCEiSearch...

Gene expression databases

BgeeiQ9CQH0.
CleanExiMM_PDZK1IP1.
ExpressionAtlasiQ9CQH0. baseline and differential.
GenevisibleiQ9CQH0. MM.

Family and domain databases

InterProiIPR026628. PDZK-int_prot1.
IPR031627. PDZK1IP1/SMIM24.
[Graphical view]
PANTHERiPTHR15296:SF0. PTHR15296:SF0. 1 hit.
PfamiPF15807. MAP17. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Pancreas and Small intestine.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N.
    Tissue: Kidney.
  3. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-85, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Kidney and Testis.

Entry informationi

Entry nameiPDZ1I_MOUSE
AccessioniPrimary (citable) accession number: Q9CQH0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: June 1, 2001
Last modified: June 8, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.