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Q9CQF0

- RM11_MOUSE

UniProt

Q9CQF0 - RM11_MOUSE

Protein

39S ribosomal protein L11, mitochondrial

Gene

Mrpl11

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 103 (01 Oct 2014)
      Sequence version 1 (01 Jun 2001)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    39S ribosomal protein L11, mitochondrial
    Short name:
    L11mt
    Short name:
    MRP-L11
    Gene namesi
    Name:Mrpl11
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 19

    Organism-specific databases

    MGIiMGI:2137215. Mrpl11.

    Subcellular locationi

    Mitochondrion 1 Publication

    GO - Cellular componenti

    1. mitochondrion Source: MGI
    2. ribosome Source: UniProtKB-KW

    Keywords - Cellular componenti

    Mitochondrion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini? – 19239S ribosomal protein L11, mitochondrialPRO_0000030444
    Transit peptidei1 – ?MitochondrionSequence Analysis

    Proteomic databases

    MaxQBiQ9CQF0.
    PaxDbiQ9CQF0.
    PRIDEiQ9CQF0.

    PTM databases

    PhosphoSiteiQ9CQF0.

    Expressioni

    Gene expression databases

    BgeeiQ9CQF0.
    CleanExiMM_MRPL11.
    GenevestigatoriQ9CQF0.

    Interactioni

    Protein-protein interaction databases

    BioGridi211460. 7 interactions.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9CQF0.
    SMRiQ9CQF0. Positions 24-155.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L11P family.Curated

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiCOG0080.
    GeneTreeiENSGT00390000003153.
    HOGENOMiHOG000082123.
    HOVERGENiHBG036110.
    InParanoidiQ9CQF0.
    KOiK02867.
    OMAiYASESPI.
    OrthoDBiEOG7HHWTP.
    PhylomeDBiQ9CQF0.
    TreeFamiTF313471.

    Family and domain databases

    Gene3Di1.10.10.250. 1 hit.
    3.30.1550.10. 1 hit.
    HAMAPiMF_00736. Ribosomal_L11.
    InterProiIPR000911. Ribosomal_L11/L12.
    IPR006519. Ribosomal_L11_bac-typ.
    IPR020783. Ribosomal_L11_C.
    IPR020784. Ribosomal_L11_N.
    [Graphical view]
    PANTHERiPTHR11661. PTHR11661. 1 hit.
    PfamiPF00298. Ribosomal_L11. 1 hit.
    PF03946. Ribosomal_L11_N. 1 hit.
    [Graphical view]
    SMARTiSM00649. RL11. 1 hit.
    [Graphical view]
    SUPFAMiSSF46906. SSF46906. 1 hit.
    SSF54747. SSF54747. 1 hit.
    TIGRFAMsiTIGR01632. L11_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9CQF0-1 [UniParc]FASTAAdd to Basket

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    MSKLSRATRT LKKPEAGGVI RSIVRAGQAI PGPPLGPILG QRGVSINQFC    50
    KEFNEKTKDI KEGIPLPTKI FIKPDRTFEL KIGQPTVSYF LKAAAGIEKG 100
    ARHTGKEVAG LVSLKHVYEI ACVKAKDDAF AMQDVPLSSV VRSIIGSARS 150
    LGIRVVKDLS AEELEAFQKE RAVFLAAQKE ADLAAQAEAA KK 192
    Length:192
    Mass (Da):20,680
    Last modified:June 1, 2001 - v1
    Checksum:i9530EFA4E41A81F3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB049639 mRNA. Translation: BAB40844.1.
    AK002797 mRNA. Translation: BAB22366.1.
    AK010329 mRNA. Translation: BAB26856.1.
    AK167247 mRNA. Translation: BAE39368.1.
    BC046750 mRNA. Translation: AAH46750.1.
    CCDSiCCDS29444.1.
    RefSeqiNP_079829.1. NM_025553.4.
    UniGeneiMm.28494.

    Genome annotation databases

    EnsembliENSMUST00000025836; ENSMUSP00000025836; ENSMUSG00000024902.
    GeneIDi66419.
    KEGGimmu:66419.
    UCSCiuc008gbt.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB049639 mRNA. Translation: BAB40844.1 .
    AK002797 mRNA. Translation: BAB22366.1 .
    AK010329 mRNA. Translation: BAB26856.1 .
    AK167247 mRNA. Translation: BAE39368.1 .
    BC046750 mRNA. Translation: AAH46750.1 .
    CCDSi CCDS29444.1.
    RefSeqi NP_079829.1. NM_025553.4.
    UniGenei Mm.28494.

    3D structure databases

    ProteinModelPortali Q9CQF0.
    SMRi Q9CQF0. Positions 24-155.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 211460. 7 interactions.

    PTM databases

    PhosphoSitei Q9CQF0.

    Proteomic databases

    MaxQBi Q9CQF0.
    PaxDbi Q9CQF0.
    PRIDEi Q9CQF0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000025836 ; ENSMUSP00000025836 ; ENSMUSG00000024902 .
    GeneIDi 66419.
    KEGGi mmu:66419.
    UCSCi uc008gbt.2. mouse.

    Organism-specific databases

    CTDi 65003.
    MGIi MGI:2137215. Mrpl11.

    Phylogenomic databases

    eggNOGi COG0080.
    GeneTreei ENSGT00390000003153.
    HOGENOMi HOG000082123.
    HOVERGENi HBG036110.
    InParanoidi Q9CQF0.
    KOi K02867.
    OMAi YASESPI.
    OrthoDBi EOG7HHWTP.
    PhylomeDBi Q9CQF0.
    TreeFami TF313471.

    Miscellaneous databases

    NextBioi 321635.
    PROi Q9CQF0.
    SOURCEi Search...

    Gene expression databases

    Bgeei Q9CQF0.
    CleanExi MM_MRPL11.
    Genevestigatori Q9CQF0.

    Family and domain databases

    Gene3Di 1.10.10.250. 1 hit.
    3.30.1550.10. 1 hit.
    HAMAPi MF_00736. Ribosomal_L11.
    InterProi IPR000911. Ribosomal_L11/L12.
    IPR006519. Ribosomal_L11_bac-typ.
    IPR020783. Ribosomal_L11_C.
    IPR020784. Ribosomal_L11_N.
    [Graphical view ]
    PANTHERi PTHR11661. PTHR11661. 1 hit.
    Pfami PF00298. Ribosomal_L11. 1 hit.
    PF03946. Ribosomal_L11_N. 1 hit.
    [Graphical view ]
    SMARTi SM00649. RL11. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46906. SSF46906. 1 hit.
    SSF54747. SSF54747. 1 hit.
    TIGRFAMsi TIGR01632. L11_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Structural compensation for the deficit of rRNA with proteins in the mammalian mitochondrial ribosome. Systematic analysis of protein components of the large ribosomal subunit from mammalian mitochondria."
      Suzuki T., Terasaki M., Takemoto-Hori C., Hanada T., Ueda T., Wada A., Watanabe K.
      J. Biol. Chem. 276:21724-21736(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], SUBCELLULAR LOCATION.
    2. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Embryonic stem cell and Kidney.
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6.
      Tissue: Brain.

    Entry informationi

    Entry nameiRM11_MOUSE
    AccessioniPrimary (citable) accession number: Q9CQF0
    Secondary accession number(s): Q3TJX7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 26, 2002
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 103 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3