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Q9CQ06

- RM24_MOUSE

UniProt

Q9CQ06 - RM24_MOUSE

Protein

39S ribosomal protein L24, mitochondrial

Gene

Mrpl24

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 100 (01 Oct 2014)
      Sequence version 1 (01 Jun 2001)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    39S ribosomal protein L24, mitochondrial
    Short name:
    L24mt
    Short name:
    MRP-L24
    Gene namesi
    Name:Mrpl24
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 3

    Organism-specific databases

    MGIiMGI:1914957. Mrpl24.

    Subcellular locationi

    Mitochondrion By similarity

    GO - Cellular componenti

    1. mitochondrion Source: MGI
    2. ribosome Source: UniProtKB-KW

    Keywords - Cellular componenti

    Mitochondrion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 99MitochondrionBy similarity
    Chaini10 – 21620739S ribosomal protein L24, mitochondrialPRO_0000270489Add
    BLAST

    Proteomic databases

    MaxQBiQ9CQ06.
    PaxDbiQ9CQ06.
    PRIDEiQ9CQ06.

    PTM databases

    PhosphoSiteiQ9CQ06.

    Expressioni

    Gene expression databases

    BgeeiQ9CQ06.
    CleanExiMM_MRPL24.
    GenevestigatoriQ9CQ06.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9CQ06.
    SMRiQ9CQ06. Positions 53-155.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini56 – 8934KOWAdd
    BLAST

    Sequence similaritiesi

    Belongs to the ribosomal protein L24P family.Curated
    Contains 1 KOW domain.Curated

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiNOG325647.
    GeneTreeiENSGT00390000014542.
    HOGENOMiHOG000031326.
    HOVERGENiHBG093899.
    InParanoidiQ9CQ06.
    KOiK02895.
    OMAiGIQETRR.
    OrthoDBiEOG7JQBP1.
    PhylomeDBiQ9CQ06.
    TreeFamiTF105984.

    Family and domain databases

    Gene3Di2.30.30.30. 1 hit.
    HAMAPiMF_01326_B. Ribosomal_L24_B.
    InterProiIPR005824. KOW.
    IPR014722. Rib_L2_dom2.
    IPR003256. Ribosomal_L24.
    IPR005825. Ribosomal_L24/26_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view]
    PANTHERiPTHR12903. PTHR12903. 1 hit.
    PfamiPF00467. KOW. 1 hit.
    [Graphical view]
    SMARTiSM00739. KOW. 1 hit.
    [Graphical view]
    SUPFAMiSSF50104. SSF50104. 1 hit.
    TIGRFAMsiTIGR01079. rplX_bact. 1 hit.
    PROSITEiPS01108. RIBOSOMAL_L24. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9CQ06-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRLSALLALA SKATSSPFYR YGMSRPGSIA DKRKNPPWSR RRPVVVEPIS    50
    DEDWHLFCGD MVEILEGKDA GKQGKVVQVV RQRNWVVLEG LNTHYRYIGR 100
    TKDHRGTMIA SEAPLLHHQV KLVDPVDRKP TEIQWRFTEA GERVRVSTRS 150
    GRIIPKPEFP RADGIVPETW TDGPKDTSVE DALERTYVPR LKTLEEDVME 200
    AMGIQETRRF KKVYWY 216
    Length:216
    Mass (Da):24,945
    Last modified:June 1, 2001 - v1
    Checksum:iDE869E7630AF599F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti7 – 93LAL → FAS in BAB25991. (PubMed:16141072)Curated
    Sequence conflicti14 – 152TS → IC in BAB25991. (PubMed:16141072)Curated
    Sequence conflicti26 – 272PG → RS in BAB25991. (PubMed:16141072)Curated
    Sequence conflicti30 – 301A → G in BAB25991. (PubMed:16141072)Curated
    Sequence conflicti34 – 341K → Q in BAB25991. (PubMed:16141072)Curated
    Sequence conflicti42 – 421R → L in BAB22737. (PubMed:16141072)Curated
    Sequence conflicti48 – 481P → A in BAB25991. (PubMed:16141072)Curated
    Sequence conflicti116 – 1161L → F in BAB32014. (PubMed:16141072)Curated
    Sequence conflicti143 – 1431R → L in BAB22737. (PubMed:16141072)Curated
    Sequence conflicti177 – 1771T → I in BAB32014. (PubMed:16141072)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK003362 mRNA. Translation: BAB22737.1.
    AK008117 mRNA. Translation: BAB25472.1.
    AK008961 mRNA. Translation: BAB25991.1.
    AK013394 mRNA. Translation: BAB28828.1.
    AK019976 mRNA. Translation: BAB31945.1.
    AK020157 mRNA. Translation: BAB32014.1.
    AK167623 mRNA. Translation: BAE39675.1.
    BC004736 mRNA. Translation: AAH04736.1.
    BC025506 mRNA. Translation: AAH25506.1.
    BC031730 mRNA. Translation: AAH31730.1.
    CCDSiCCDS38477.1.
    RefSeqiNP_080867.2. NM_026591.3.
    XP_006502002.1. XM_006501939.1.
    XP_006502003.1. XM_006501940.1.
    XP_006502004.1. XM_006501941.1.
    XP_006502005.1. XM_006501942.1.
    UniGeneiMm.393802.

    Genome annotation databases

    EnsembliENSMUST00000019854; ENSMUSP00000019854; ENSMUSG00000019710.
    ENSMUST00000119968; ENSMUSP00000114111; ENSMUSG00000019710.
    ENSMUST00000121048; ENSMUSP00000113959; ENSMUSG00000019710.
    ENSMUST00000121920; ENSMUSP00000112885; ENSMUSG00000019710.
    GeneIDi67707.
    KEGGimmu:67707.
    UCSCiuc008ptd.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK003362 mRNA. Translation: BAB22737.1 .
    AK008117 mRNA. Translation: BAB25472.1 .
    AK008961 mRNA. Translation: BAB25991.1 .
    AK013394 mRNA. Translation: BAB28828.1 .
    AK019976 mRNA. Translation: BAB31945.1 .
    AK020157 mRNA. Translation: BAB32014.1 .
    AK167623 mRNA. Translation: BAE39675.1 .
    BC004736 mRNA. Translation: AAH04736.1 .
    BC025506 mRNA. Translation: AAH25506.1 .
    BC031730 mRNA. Translation: AAH31730.1 .
    CCDSi CCDS38477.1.
    RefSeqi NP_080867.2. NM_026591.3.
    XP_006502002.1. XM_006501939.1.
    XP_006502003.1. XM_006501940.1.
    XP_006502004.1. XM_006501941.1.
    XP_006502005.1. XM_006501942.1.
    UniGenei Mm.393802.

    3D structure databases

    ProteinModelPortali Q9CQ06.
    SMRi Q9CQ06. Positions 53-155.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei Q9CQ06.

    Proteomic databases

    MaxQBi Q9CQ06.
    PaxDbi Q9CQ06.
    PRIDEi Q9CQ06.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000019854 ; ENSMUSP00000019854 ; ENSMUSG00000019710 .
    ENSMUST00000119968 ; ENSMUSP00000114111 ; ENSMUSG00000019710 .
    ENSMUST00000121048 ; ENSMUSP00000113959 ; ENSMUSG00000019710 .
    ENSMUST00000121920 ; ENSMUSP00000112885 ; ENSMUSG00000019710 .
    GeneIDi 67707.
    KEGGi mmu:67707.
    UCSCi uc008ptd.1. mouse.

    Organism-specific databases

    CTDi 79590.
    MGIi MGI:1914957. Mrpl24.

    Phylogenomic databases

    eggNOGi NOG325647.
    GeneTreei ENSGT00390000014542.
    HOGENOMi HOG000031326.
    HOVERGENi HBG093899.
    InParanoidi Q9CQ06.
    KOi K02895.
    OMAi GIQETRR.
    OrthoDBi EOG7JQBP1.
    PhylomeDBi Q9CQ06.
    TreeFami TF105984.

    Miscellaneous databases

    NextBioi 325321.
    PROi Q9CQ06.
    SOURCEi Search...

    Gene expression databases

    Bgeei Q9CQ06.
    CleanExi MM_MRPL24.
    Genevestigatori Q9CQ06.

    Family and domain databases

    Gene3Di 2.30.30.30. 1 hit.
    HAMAPi MF_01326_B. Ribosomal_L24_B.
    InterProi IPR005824. KOW.
    IPR014722. Rib_L2_dom2.
    IPR003256. Ribosomal_L24.
    IPR005825. Ribosomal_L24/26_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view ]
    PANTHERi PTHR12903. PTHR12903. 1 hit.
    Pfami PF00467. KOW. 1 hit.
    [Graphical view ]
    SMARTi SM00739. KOW. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50104. SSF50104. 1 hit.
    TIGRFAMsi TIGR01079. rplX_bact. 1 hit.
    PROSITEi PS01108. RIBOSOMAL_L24. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Placenta, Small intestine, Stomach and Wolffian duct.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: Czech II and FVB/N.
      Tissue: Mammary gland.

    Entry informationi

    Entry nameiRM24_MOUSE
    AccessioniPrimary (citable) accession number: Q9CQ06
    Secondary accession number(s): Q9CX51, Q9D1L7, Q9D7R6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 9, 2007
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 100 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3