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Q9CQ06

- RM24_MOUSE

UniProt

Q9CQ06 - RM24_MOUSE

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Protein
39S ribosomal protein L24, mitochondrial
Gene
Mrpl24
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L24, mitochondrial
Short name:
L24mt
Short name:
MRP-L24
Gene namesi
Name:Mrpl24
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 3

Organism-specific databases

MGIiMGI:1914957. Mrpl24.

Subcellular locationi

Mitochondrion By similarity UniRule annotation

GO - Cellular componenti

  1. mitochondrion Source: MGI
  2. ribosome Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 99Mitochondrion By similarity
Chaini10 – 21620739S ribosomal protein L24, mitochondrialUniRule annotation
PRO_0000270489Add
BLAST

Proteomic databases

MaxQBiQ9CQ06.
PaxDbiQ9CQ06.
PRIDEiQ9CQ06.

PTM databases

PhosphoSiteiQ9CQ06.

Expressioni

Gene expression databases

BgeeiQ9CQ06.
CleanExiMM_MRPL24.
GenevestigatoriQ9CQ06.

Structurei

3D structure databases

ProteinModelPortaliQ9CQ06.
SMRiQ9CQ06. Positions 53-155.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini56 – 8934KOW
Add
BLAST

Sequence similaritiesi

Contains 1 KOW domain.

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiNOG325647.
GeneTreeiENSGT00390000014542.
HOGENOMiHOG000031326.
HOVERGENiHBG093899.
InParanoidiQ9CQ06.
KOiK02895.
OMAiGIQETRR.
OrthoDBiEOG7JQBP1.
PhylomeDBiQ9CQ06.
TreeFamiTF105984.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
HAMAPiMF_01326_B. Ribosomal_L24_B.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR12903. PTHR12903. 1 hit.
PfamiPF00467. KOW. 1 hit.
[Graphical view]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01079. rplX_bact. 1 hit.
PROSITEiPS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9CQ06-1 [UniParc]FASTAAdd to Basket

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MRLSALLALA SKATSSPFYR YGMSRPGSIA DKRKNPPWSR RRPVVVEPIS    50
DEDWHLFCGD MVEILEGKDA GKQGKVVQVV RQRNWVVLEG LNTHYRYIGR 100
TKDHRGTMIA SEAPLLHHQV KLVDPVDRKP TEIQWRFTEA GERVRVSTRS 150
GRIIPKPEFP RADGIVPETW TDGPKDTSVE DALERTYVPR LKTLEEDVME 200
AMGIQETRRF KKVYWY 216
Length:216
Mass (Da):24,945
Last modified:June 1, 2001 - v1
Checksum:iDE869E7630AF599F
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti7 – 93LAL → FAS in BAB25991. 1 Publication
Sequence conflicti14 – 152TS → IC in BAB25991. 1 Publication
Sequence conflicti26 – 272PG → RS in BAB25991. 1 Publication
Sequence conflicti30 – 301A → G in BAB25991. 1 Publication
Sequence conflicti34 – 341K → Q in BAB25991. 1 Publication
Sequence conflicti42 – 421R → L in BAB22737. 1 Publication
Sequence conflicti48 – 481P → A in BAB25991. 1 Publication
Sequence conflicti116 – 1161L → F in BAB32014. 1 Publication
Sequence conflicti143 – 1431R → L in BAB22737. 1 Publication
Sequence conflicti177 – 1771T → I in BAB32014. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK003362 mRNA. Translation: BAB22737.1.
AK008117 mRNA. Translation: BAB25472.1.
AK008961 mRNA. Translation: BAB25991.1.
AK013394 mRNA. Translation: BAB28828.1.
AK019976 mRNA. Translation: BAB31945.1.
AK020157 mRNA. Translation: BAB32014.1.
AK167623 mRNA. Translation: BAE39675.1.
BC004736 mRNA. Translation: AAH04736.1.
BC025506 mRNA. Translation: AAH25506.1.
BC031730 mRNA. Translation: AAH31730.1.
CCDSiCCDS38477.1.
RefSeqiNP_080867.2. NM_026591.3.
XP_006502002.1. XM_006501939.1.
XP_006502003.1. XM_006501940.1.
XP_006502004.1. XM_006501941.1.
XP_006502005.1. XM_006501942.1.
UniGeneiMm.393802.

Genome annotation databases

EnsembliENSMUST00000019854; ENSMUSP00000019854; ENSMUSG00000019710.
ENSMUST00000119968; ENSMUSP00000114111; ENSMUSG00000019710.
ENSMUST00000121048; ENSMUSP00000113959; ENSMUSG00000019710.
ENSMUST00000121920; ENSMUSP00000112885; ENSMUSG00000019710.
GeneIDi67707.
KEGGimmu:67707.
UCSCiuc008ptd.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK003362 mRNA. Translation: BAB22737.1 .
AK008117 mRNA. Translation: BAB25472.1 .
AK008961 mRNA. Translation: BAB25991.1 .
AK013394 mRNA. Translation: BAB28828.1 .
AK019976 mRNA. Translation: BAB31945.1 .
AK020157 mRNA. Translation: BAB32014.1 .
AK167623 mRNA. Translation: BAE39675.1 .
BC004736 mRNA. Translation: AAH04736.1 .
BC025506 mRNA. Translation: AAH25506.1 .
BC031730 mRNA. Translation: AAH31730.1 .
CCDSi CCDS38477.1.
RefSeqi NP_080867.2. NM_026591.3.
XP_006502002.1. XM_006501939.1.
XP_006502003.1. XM_006501940.1.
XP_006502004.1. XM_006501941.1.
XP_006502005.1. XM_006501942.1.
UniGenei Mm.393802.

3D structure databases

ProteinModelPortali Q9CQ06.
SMRi Q9CQ06. Positions 53-155.
ModBasei Search...

PTM databases

PhosphoSitei Q9CQ06.

Proteomic databases

MaxQBi Q9CQ06.
PaxDbi Q9CQ06.
PRIDEi Q9CQ06.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000019854 ; ENSMUSP00000019854 ; ENSMUSG00000019710 .
ENSMUST00000119968 ; ENSMUSP00000114111 ; ENSMUSG00000019710 .
ENSMUST00000121048 ; ENSMUSP00000113959 ; ENSMUSG00000019710 .
ENSMUST00000121920 ; ENSMUSP00000112885 ; ENSMUSG00000019710 .
GeneIDi 67707.
KEGGi mmu:67707.
UCSCi uc008ptd.1. mouse.

Organism-specific databases

CTDi 79590.
MGIi MGI:1914957. Mrpl24.

Phylogenomic databases

eggNOGi NOG325647.
GeneTreei ENSGT00390000014542.
HOGENOMi HOG000031326.
HOVERGENi HBG093899.
InParanoidi Q9CQ06.
KOi K02895.
OMAi GIQETRR.
OrthoDBi EOG7JQBP1.
PhylomeDBi Q9CQ06.
TreeFami TF105984.

Miscellaneous databases

NextBioi 325321.
PROi Q9CQ06.
SOURCEi Search...

Gene expression databases

Bgeei Q9CQ06.
CleanExi MM_MRPL24.
Genevestigatori Q9CQ06.

Family and domain databases

Gene3Di 2.30.30.30. 1 hit.
HAMAPi MF_01326_B. Ribosomal_L24_B.
InterProi IPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view ]
PANTHERi PTHR12903. PTHR12903. 1 hit.
Pfami PF00467. KOW. 1 hit.
[Graphical view ]
SMARTi SM00739. KOW. 1 hit.
[Graphical view ]
SUPFAMi SSF50104. SSF50104. 1 hit.
TIGRFAMsi TIGR01079. rplX_bact. 1 hit.
PROSITEi PS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Placenta, Small intestine, Stomach and Wolffian duct.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Czech II and FVB/N.
    Tissue: Mammary gland.

Entry informationi

Entry nameiRM24_MOUSE
AccessioniPrimary (citable) accession number: Q9CQ06
Secondary accession number(s): Q9CX51, Q9D1L7, Q9D7R6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: June 1, 2001
Last modified: July 9, 2014
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi