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Protein

28S ribosomal protein S16, mitochondrial

Gene

Mrps16

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: UniProtKB

GO - Biological processi

  • mitochondrial translation Source: UniProtKB

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-5389840. Mitochondrial translation elongation.
R-MMU-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
28S ribosomal protein S16, mitochondrial
Short name:
MRP-S16
Short name:
S16mt
Gene namesi
Name:Mrps16
Synonyms:Rpms16
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 14

Organism-specific databases

MGIiMGI:1913492. Mrps16.

Subcellular locationi

  • Mitochondrion By similarity

GO - Cellular componenti

  • cytosol Source: MGI
  • mitochondrial small ribosomal subunit Source: UniProtKB
  • mitochondrion Source: MGI

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 34MitochondrionSequence analysisAdd BLAST34
ChainiPRO_000003061935 – 13528S ribosomal protein S16, mitochondrialAdd BLAST101

Proteomic databases

EPDiQ9CPX7.
MaxQBiQ9CPX7.
PaxDbiQ9CPX7.
PeptideAtlasiQ9CPX7.
PRIDEiQ9CPX7.

PTM databases

PhosphoSitePlusiQ9CPX7.
SwissPalmiQ9CPX7.

Expressioni

Gene expression databases

BgeeiENSMUSG00000049960.
CleanExiMM_MRPS16.
GenevisibleiQ9CPX7. MM.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.By similarity

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000055619.

Structurei

3D structure databases

ProteinModelPortaliQ9CPX7.
SMRiQ9CPX7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3419. Eukaryota.
COG0228. LUCA.
GeneTreeiENSGT00390000014309.
HOGENOMiHOG000246720.
HOVERGENiHBG017758.
InParanoidiQ9CPX7.
KOiK02959.
OMAiYNKRARD.
OrthoDBiEOG091G15N9.
PhylomeDBiQ9CPX7.
TreeFamiTF105637.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiView protein in InterPro
IPR000307. Ribosomal_S16.
IPR023803. Ribosomal_S16_dom.
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiView protein in Pfam
PF00886. Ribosomal_S16. 1 hit.
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9CPX7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVQLTTIFCK AYHGGHLTIR LALGGCTNRP FYRIVAAHNK CPRDGRFVEQ
60 70 80 90 100
LGSYDPLPNS HGEKLVALNL DRIRHWIGCG AHLSKPMEKL LGLSGFFPLH
110 120 130
PMMITNAERL RRRRAREVLL ASQKAESEAK ETEAS
Length:135
Mass (Da):15,192
Last modified:April 27, 2001 - v1
Checksum:iEBA2A7209177B50C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB049949 mRNA. Translation: BAB41002.1.
AK019243 mRNA. Translation: BAB31623.1.
AK005206 mRNA. Translation: BAB23884.1.
BC024656 mRNA. Translation: AAH24656.1.
CCDSiCCDS36817.1.
RefSeqiNP_079716.1. NM_025440.2.
UniGeneiMm.23747.

Genome annotation databases

EnsembliENSMUST00000061444; ENSMUSP00000055619; ENSMUSG00000049960.
GeneIDi66242.
KEGGimmu:66242.
UCSCiuc007sjp.1. mouse.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRT16_MOUSE
AccessioniPrimary (citable) accession number: Q9CPX7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: April 27, 2001
Last modified: June 7, 2017
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families