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Protein

28S ribosomal protein S16, mitochondrial

Gene

Mrps16

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: UniProtKB

GO - Biological processi

  • mitochondrial translation Source: UniProtKB
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-5389840. Mitochondrial translation elongation.
R-MMU-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
28S ribosomal protein S16, mitochondrial
Short name:
MRP-S16
Short name:
S16mt
Gene namesi
Name:Mrps16
Synonyms:Rpms16
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 14

Organism-specific databases

MGIiMGI:1913492. Mrps16.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: MGI
  • mitochondrial small ribosomal subunit Source: UniProtKB
  • mitochondrion Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 34MitochondrionSequence analysisAdd BLAST34
ChainiPRO_000003061935 – 13528S ribosomal protein S16, mitochondrialAdd BLAST101

Proteomic databases

EPDiQ9CPX7.
MaxQBiQ9CPX7.
PaxDbiQ9CPX7.
PeptideAtlasiQ9CPX7.
PRIDEiQ9CPX7.

PTM databases

PhosphoSitePlusiQ9CPX7.
SwissPalmiQ9CPX7.

Expressioni

Gene expression databases

BgeeiENSMUSG00000049960.
CleanExiMM_MRPS16.
GenevisibleiQ9CPX7. MM.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000055619.

Structurei

3D structure databases

ProteinModelPortaliQ9CPX7.
SMRiQ9CPX7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S16P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3419. Eukaryota.
COG0228. LUCA.
GeneTreeiENSGT00390000014309.
HOGENOMiHOG000246720.
HOVERGENiHBG017758.
InParanoidiQ9CPX7.
KOiK02959.
OMAiPFFRVMA.
OrthoDBiEOG091G15N9.
PhylomeDBiQ9CPX7.
TreeFamiTF105637.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiIPR000307. Ribosomal_S16.
IPR023803. Ribosomal_S16_dom.
[Graphical view]
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiPF00886. Ribosomal_S16. 1 hit.
[Graphical view]
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9CPX7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVQLTTIFCK AYHGGHLTIR LALGGCTNRP FYRIVAAHNK CPRDGRFVEQ
60 70 80 90 100
LGSYDPLPNS HGEKLVALNL DRIRHWIGCG AHLSKPMEKL LGLSGFFPLH
110 120 130
PMMITNAERL RRRRAREVLL ASQKAESEAK ETEAS
Length:135
Mass (Da):15,192
Last modified:April 27, 2001 - v1
Checksum:iEBA2A7209177B50C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB049949 mRNA. Translation: BAB41002.1.
AK019243 mRNA. Translation: BAB31623.1.
AK005206 mRNA. Translation: BAB23884.1.
BC024656 mRNA. Translation: AAH24656.1.
CCDSiCCDS36817.1.
RefSeqiNP_079716.1. NM_025440.2.
UniGeneiMm.23747.

Genome annotation databases

EnsembliENSMUST00000061444; ENSMUSP00000055619; ENSMUSG00000049960.
GeneIDi66242.
KEGGimmu:66242.
UCSCiuc007sjp.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB049949 mRNA. Translation: BAB41002.1.
AK019243 mRNA. Translation: BAB31623.1.
AK005206 mRNA. Translation: BAB23884.1.
BC024656 mRNA. Translation: AAH24656.1.
CCDSiCCDS36817.1.
RefSeqiNP_079716.1. NM_025440.2.
UniGeneiMm.23747.

3D structure databases

ProteinModelPortaliQ9CPX7.
SMRiQ9CPX7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000055619.

PTM databases

PhosphoSitePlusiQ9CPX7.
SwissPalmiQ9CPX7.

Proteomic databases

EPDiQ9CPX7.
MaxQBiQ9CPX7.
PaxDbiQ9CPX7.
PeptideAtlasiQ9CPX7.
PRIDEiQ9CPX7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000061444; ENSMUSP00000055619; ENSMUSG00000049960.
GeneIDi66242.
KEGGimmu:66242.
UCSCiuc007sjp.1. mouse.

Organism-specific databases

CTDi51021.
MGIiMGI:1913492. Mrps16.

Phylogenomic databases

eggNOGiKOG3419. Eukaryota.
COG0228. LUCA.
GeneTreeiENSGT00390000014309.
HOGENOMiHOG000246720.
HOVERGENiHBG017758.
InParanoidiQ9CPX7.
KOiK02959.
OMAiPFFRVMA.
OrthoDBiEOG091G15N9.
PhylomeDBiQ9CPX7.
TreeFamiTF105637.

Enzyme and pathway databases

ReactomeiR-MMU-5389840. Mitochondrial translation elongation.
R-MMU-5419276. Mitochondrial translation termination.

Miscellaneous databases

PROiQ9CPX7.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000049960.
CleanExiMM_MRPS16.
GenevisibleiQ9CPX7. MM.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiIPR000307. Ribosomal_S16.
IPR023803. Ribosomal_S16_dom.
[Graphical view]
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiPF00886. Ribosomal_S16. 1 hit.
[Graphical view]
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRT16_MOUSE
AccessioniPrimary (citable) accession number: Q9CPX7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: April 27, 2001
Last modified: November 2, 2016
This is version 123 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.