Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

RNA-binding protein PNO1

Gene

Pno1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
RNA-binding protein PNO1
Gene namesi
Name:Pno1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1913499. Pno1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002705411 – 248RNA-binding protein PNO1Add BLAST248

Proteomic databases

EPDiQ9CPS7.
MaxQBiQ9CPS7.
PaxDbiQ9CPS7.
PeptideAtlasiQ9CPS7.
PRIDEiQ9CPS7.

PTM databases

iPTMnetiQ9CPS7.
PhosphoSitePlusiQ9CPS7.

Expressioni

Gene expression databases

BgeeiENSMUSG00000020116.
CleanExiMM_PNO1.
GenevisibleiQ9CPS7. MM.

Interactioni

Protein-protein interaction databases

BioGridi211326. 1 interactor.
IntActiQ9CPS7. 2 interactors.
MINTiMINT-4124657.
STRINGi10090.ENSMUSP00000020317.

Structurei

3D structure databases

ProteinModelPortaliQ9CPS7.
SMRiQ9CPS7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini169 – 221KHAdd BLAST53

Sequence similaritiesi

Belongs to the PNO1 family.Curated
Contains 1 KH domain.Curated

Phylogenomic databases

eggNOGiKOG3273. Eukaryota.
COG1094. LUCA.
GeneTreeiENSGT00390000018052.
HOGENOMiHOG000181708.
HOVERGENiHBG055635.
InParanoidiQ9CPS7.
KOiK11884.
OMAiFVKAFLC.
OrthoDBiEOG091G0L5I.
PhylomeDBiQ9CPS7.
TreeFamiTF300114.

Family and domain databases

Gene3Di3.30.1370.10. 1 hit.
InterProiIPR004087. KH_dom.
IPR004088. KH_dom_type_1.
[Graphical view]
SMARTiSM00322. KH. 1 hit.
[Graphical view]
SUPFAMiSSF54791. SSF54791. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9CPS7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METQSTGTED GFTPVTHRGG RRAKKRQAEQ SSAAGQDGEA GRMDTEEARP
60 70 80 90 100
AKRPVFPPLS GDQLLTGKEE TRKIPVPGNR YTPLKENWMK IFTPIVEHLG
110 120 130 140 150
LQIRFNLKSR NVEIRTCKDT KDVSALTKAA DFVKAFVLGF QVEDALALIR
160 170 180 190 200
LDDLFLESFE ITDVKPLKGD HLSRAIGRIA GKGGKTKFTI ENVTRTRIVL
210 220 230 240
ADVHVHILGS FQNIKMARTA ICNLILGNPP SKVYGNIRAV ASRSADRF
Length:248
Mass (Da):27,454
Last modified:June 1, 2001 - v1
Checksum:iFBA75C3F79638251
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF349950 mRNA. Translation: AAK29665.1.
AK007324 mRNA. Translation: BAB24959.1.
AK009146 mRNA. Translation: BAB26104.1.
AK146152 mRNA. Translation: BAE26936.1.
AK165942 mRNA. Translation: BAE38474.1.
AK168177 mRNA. Translation: BAE40137.1.
AL713926 Genomic DNA. Translation: CAI51913.1.
BC020037 mRNA. Translation: AAH20037.1.
CCDSiCCDS24449.1.
RefSeqiNP_079719.1. NM_025443.2.
UniGeneiMm.27831.

Genome annotation databases

EnsembliENSMUST00000020317; ENSMUSP00000020317; ENSMUSG00000020116.
GeneIDi66249.
KEGGimmu:66249.
UCSCiuc007icc.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF349950 mRNA. Translation: AAK29665.1.
AK007324 mRNA. Translation: BAB24959.1.
AK009146 mRNA. Translation: BAB26104.1.
AK146152 mRNA. Translation: BAE26936.1.
AK165942 mRNA. Translation: BAE38474.1.
AK168177 mRNA. Translation: BAE40137.1.
AL713926 Genomic DNA. Translation: CAI51913.1.
BC020037 mRNA. Translation: AAH20037.1.
CCDSiCCDS24449.1.
RefSeqiNP_079719.1. NM_025443.2.
UniGeneiMm.27831.

3D structure databases

ProteinModelPortaliQ9CPS7.
SMRiQ9CPS7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi211326. 1 interactor.
IntActiQ9CPS7. 2 interactors.
MINTiMINT-4124657.
STRINGi10090.ENSMUSP00000020317.

PTM databases

iPTMnetiQ9CPS7.
PhosphoSitePlusiQ9CPS7.

Proteomic databases

EPDiQ9CPS7.
MaxQBiQ9CPS7.
PaxDbiQ9CPS7.
PeptideAtlasiQ9CPS7.
PRIDEiQ9CPS7.

Protocols and materials databases

DNASUi66249.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000020317; ENSMUSP00000020317; ENSMUSG00000020116.
GeneIDi66249.
KEGGimmu:66249.
UCSCiuc007icc.1. mouse.

Organism-specific databases

CTDi56902.
MGIiMGI:1913499. Pno1.

Phylogenomic databases

eggNOGiKOG3273. Eukaryota.
COG1094. LUCA.
GeneTreeiENSGT00390000018052.
HOGENOMiHOG000181708.
HOVERGENiHBG055635.
InParanoidiQ9CPS7.
KOiK11884.
OMAiFVKAFLC.
OrthoDBiEOG091G0L5I.
PhylomeDBiQ9CPS7.
TreeFamiTF300114.

Miscellaneous databases

PROiQ9CPS7.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000020116.
CleanExiMM_PNO1.
GenevisibleiQ9CPS7. MM.

Family and domain databases

Gene3Di3.30.1370.10. 1 hit.
InterProiIPR004087. KH_dom.
IPR004088. KH_dom_type_1.
[Graphical view]
SMARTiSM00322. KH. 1 hit.
[Graphical view]
SUPFAMiSSF54791. SSF54791. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiPNO1_MOUSE
AccessioniPrimary (citable) accession number: Q9CPS7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: June 1, 2001
Last modified: November 2, 2016
This is version 115 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.