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Protein
Submitted name:

HU-like DNA-binding protein

Gene

hslB

Organism
Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-bindingSAAS annotationImported

Enzyme and pathway databases

BioCyciLLAC272623:GHSH-950-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
HU-like DNA-binding proteinImported
Gene namesi
Name:hslBImported
ORF Names:L102634Imported
OrganismiLactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis)Imported
Taxonomic identifieri272623 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus
Proteomesi
  • UP000002196 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PaxDbiQ9CH59.

Interactioni

Protein-protein interaction databases

STRINGi272623.L102634.

Structurei

3D structure databases

ProteinModelPortaliQ9CH59.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial histone-like protein family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiCOG0776. LUCA.
HOGENOMiHOG000043829.
KOiK03530.
OMAiVADSAKM.

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
InterProiIPR000119. Hist_DNA-bd.
IPR010992. IHF-like_DNA-bd_dom.
[Graphical view]
PfamiPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
PRINTSiPR01727. DNABINDINGHU.
SMARTiSM00411. BHL. 1 hit.
[Graphical view]
SUPFAMiSSF47729. SSF47729. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9CH59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASKQELIDY VADRTELSKV NAAKAINAFV EAITYYISEG TPVHISNFGT
60 70 80 90 100
FEVRKRAARV SHDVHSREKI LVGEQNIPVF RAGKALKLAT KQELSDEDMV
110
IETLSNMILE VQQHD
Length:115
Mass (Da):12,916
Last modified:June 1, 2001 - v1
Checksum:i76F59BA59999B43D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005176 Genomic DNA. Translation: AAK04978.1.
PIRiH86734.
RefSeqiNP_267036.1. NC_002662.1.
WP_003131385.1. NC_002662.1.

Genome annotation databases

EnsemblBacteriaiAAK04978; AAK04978; L102634.
GeneIDi1114510.
KEGGilla:L102634.
PATRICi22294070. VBILacLac136773_0942.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005176 Genomic DNA. Translation: AAK04978.1.
PIRiH86734.
RefSeqiNP_267036.1. NC_002662.1.
WP_003131385.1. NC_002662.1.

3D structure databases

ProteinModelPortaliQ9CH59.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272623.L102634.

Proteomic databases

PaxDbiQ9CH59.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK04978; AAK04978; L102634.
GeneIDi1114510.
KEGGilla:L102634.
PATRICi22294070. VBILacLac136773_0942.

Phylogenomic databases

eggNOGiCOG0776. LUCA.
HOGENOMiHOG000043829.
KOiK03530.
OMAiVADSAKM.

Enzyme and pathway databases

BioCyciLLAC272623:GHSH-950-MONOMER.

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
InterProiIPR000119. Hist_DNA-bd.
IPR010992. IHF-like_DNA-bd_dom.
[Graphical view]
PfamiPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
PRINTSiPR01727. DNABINDINGHU.
SMARTiSM00411. BHL. 1 hit.
[Graphical view]
SUPFAMiSSF47729. SSF47729. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9CH59_LACLA
AccessioniPrimary (citable) accession number: Q9CH59
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 7, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.