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Protein
Submitted name:

HU-like DNA-binding protein

Gene

hslB

Organism
Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-bindingSAAS annotationImported

Enzyme and pathway databases

BioCyciLLAC272623:GHSH-950-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
HU-like DNA-binding proteinImported
Gene namesi
Name:hslBImported
ORF Names:L102634Imported
OrganismiLactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis)Imported
Taxonomic identifieri272623 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus
Proteomesi
  • UP000002196 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PaxDbiQ9CH59.

Interactioni

Protein-protein interaction databases

STRINGi272623.L102634.

Structurei

3D structure databases

ProteinModelPortaliQ9CH59.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial histone-like protein family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiCOG0776. LUCA.
HOGENOMiHOG000043829.
KOiK03530.
OMAiKKERTTI.
OrthoDBiEOG615VS6.

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
InterProiIPR000119. Hist_DNA-bd.
IPR010992. IHF-like_DNA-bd_dom.
[Graphical view]
PfamiPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
PRINTSiPR01727. DNABINDINGHU.
SMARTiSM00411. BHL. 1 hit.
[Graphical view]
SUPFAMiSSF47729. SSF47729. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9CH59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASKQELIDY VADRTELSKV NAAKAINAFV EAITYYISEG TPVHISNFGT
60 70 80 90 100
FEVRKRAARV SHDVHSREKI LVGEQNIPVF RAGKALKLAT KQELSDEDMV
110
IETLSNMILE VQQHD
Length:115
Mass (Da):12,916
Last modified:June 1, 2001 - v1
Checksum:i76F59BA59999B43D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005176 Genomic DNA. Translation: AAK04978.1.
PIRiH86734.
RefSeqiNP_267036.1. NC_002662.1.
WP_003131385.1. NC_002662.1.

Genome annotation databases

EnsemblBacteriaiAAK04978; AAK04978; L102634.
GeneIDi1114510.
KEGGilla:L102634.
PATRICi22294070. VBILacLac136773_0942.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005176 Genomic DNA. Translation: AAK04978.1.
PIRiH86734.
RefSeqiNP_267036.1. NC_002662.1.
WP_003131385.1. NC_002662.1.

3D structure databases

ProteinModelPortaliQ9CH59.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272623.L102634.

Proteomic databases

PaxDbiQ9CH59.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK04978; AAK04978; L102634.
GeneIDi1114510.
KEGGilla:L102634.
PATRICi22294070. VBILacLac136773_0942.

Phylogenomic databases

eggNOGiCOG0776. LUCA.
HOGENOMiHOG000043829.
KOiK03530.
OMAiKKERTTI.
OrthoDBiEOG615VS6.

Enzyme and pathway databases

BioCyciLLAC272623:GHSH-950-MONOMER.

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
InterProiIPR000119. Hist_DNA-bd.
IPR010992. IHF-like_DNA-bd_dom.
[Graphical view]
PfamiPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
PRINTSiPR01727. DNABINDINGHU.
SMARTiSM00411. BHL. 1 hit.
[Graphical view]
SUPFAMiSSF47729. SSF47729. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403."
    Bolotin A., Wincker P., Mauger S., Jaillon O., Malarme K., Weissenbach J., Ehrlich S.D., Sorokin A.
    Genome Res. 11:731-753(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: IL1403Imported.

Entry informationi

Entry nameiQ9CH59_LACLA
AccessioniPrimary (citable) accession number: Q9CH59
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: May 11, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.