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Protein
Submitted name:

Alpha-amylase

Gene

amyL

Organism
Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei229 – 2291NucleophileUniRule annotation
Active sitei259 – 2591Proton donorUniRule annotation

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciLLAC272623:GHSH-1339-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:amyLImported
ORF Names:L77437Imported
OrganismiLactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis)Imported
Taxonomic identifieri272623 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus
ProteomesiUP000002196: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272623.L77437.

Structurei

3D structure databases

ProteinModelPortaliQ9CG59.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9CG59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTILQAFEW YLPSDSQHWN NIKENIPDLG KLGFSGLWLP PASKAASGVE
60 70 80 90 100
DVGYGTYDLF DLGEFDQKGT IPTKYGTKDE YLDLINTLHH NNIEVYADIV
110 120 130 140 150
FNHMMGADET ETIEADIKAE DNHLHNIENN KTVEVWTKFT FPGRQGKYDN
160 170 180 190 200
YIWTWHNFTG IDYDERKNQE EILEFEGHEW DENVDSENNN FDYLMGADLD
210 220 230 240 250
FSVSETVEQL EKWGHWFSEM TKIDGFRLDA IKHIDFKYFD KWLEQRAKQL
260 270 280 290 300
DRKLFIVGEY WSDDLGKLEY YLEQSSDRIQ LFDVPLHFNM KEASSTNGEF
310 320 330 340 350
DMRTLFDHTL TASQPELSVT FVDNHDTQEG QALQSWIPAW FKEHAYSLIL
360 370 380 390 400
LRKKETPTVF WGDLYGIPSH NVNPVGDNLR TMIALRKDSE FLRENDYFDH
410 420 430 440 450
PDIIGWTNIL KIDNKEYGLS CILTNKNGGS KYMIIDKAYA GKVYIDLFGR
460 470 480 490
HEIPITLDQN GGAEFYVNDG SVSVWVDKEI VSKIDQMNFQ N
Length:491
Mass (Da):57,200
Last modified:June 1, 2001 - v1
Checksum:iC044DCACF2BBF527
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005176 Genomic DNA. Translation: AAK05349.1.
PIRiC86781.
RefSeqiNP_267407.1. NC_002662.1.

Genome annotation databases

EnsemblBacteriaiAAK05349; AAK05349; L77437.
GeneIDi1114900.
KEGGilla:L77437.
PATRICi22294888. VBILacLac136773_1352.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005176 Genomic DNA. Translation: AAK05349.1.
PIRiC86781.
RefSeqiNP_267407.1. NC_002662.1.

3D structure databases

ProteinModelPortaliQ9CG59.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272623.L77437.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK05349; AAK05349; L77437.
GeneIDi1114900.
KEGGilla:L77437.
PATRICi22294888. VBILacLac136773_1352.

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciLLAC272623:GHSH-1339-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403."
    Bolotin A., Wincker P., Mauger S., Jaillon O., Malarme K., Weissenbach J., Ehrlich S.D., Sorokin A.
    Genome Res. 11:731-753(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: IL1403Imported.

Entry informationi

Entry nameiQ9CG59_LACLA
AccessioniPrimary (citable) accession number: Q9CG59
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: February 4, 2015
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.