Q9CF33 (Q9CF33_LACLA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Catabolite control protein A EMBL AAK05746.1

Gene names

Name:	ccpA EMBL AAK05746.1
Ordered Locus Names:	LL1648
ORF Names:	L0143 EMBL AAK05746.1

Organism

Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis) [Reference proteome] [HAMAP]

Taxonomic identifier

272623 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Lactococcus › Lactococcus lactis › Lactococcus lactis subsp. lactis

Protein attributes

Sequence length	332 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Contains 1 HTH lacI-type DNA-binding domain. SAAS SAAS000843

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS000843 RuleBase RU000708
Ligand	DNA-binding SAAS SAAS000843 RuleBase RU000708
Technical term	3D-structure PDB 2O20 Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9CF33 [UniParc]. Last modified June 1, 2001. Version 1. Checksum: 1968862CCE29251A	FASTA	332	36,647
	10 20 30 40 50 60 MVESTTTIYD VARVAGVSMA TVSRVVNGNA NVKEKTRQKV LEAIAELDYR PNAVARGLAS 70 80 90 100 110 120 KRTTTVGVIL PTITSTYFAA ITRGVDDIDS MYKYNMILAN SDNDVEKEEK VLETFLSKQV 130 140 150 160 170 180 DGIVYMGSSL DEKIRTSLKN SRTPVVLVGT IDGDKEIPSV NIDYHLAAYQ STKKLIDSGN 190 200 210 220 230 240 KKIAYIMGSL KDVENTERMV GYQEALLEAN IEFDENLVFE GNYSYEQGKA LAERLLERGA 250 260 270 280 290 300 TSAVVSHDTV AVGLLSAMMD KGVKVPEDFE IISGANSPIT QYTYPTLTSV NQPLYDLGAV 310 320 330 AMRLLTKLML KEDVEQNQLV LDHEIFSRRS TK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403." Bolotin A., Wincker P., Mauger S., Jaillon O., Malarme K., Weissenbach J., Ehrlich S.D., Sorokin A. Genome Res. 11:731-753(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IL1403.
[2]	"Structure of the transcription regulator CcpA from Lactococcus lactis." Loll B., Kowalczyk M., Alings C., Chieduch A., Bardowski J., Saenger W., Biesiadka J. Acta Crystallogr. D 63:431-436(2007) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE005176 Genomic DNA. Translation: AAK05746.1.

PIR

H86830.

RefSeq

NP_267804.1. NC_002662.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2O20	X-ray	1.90	A/B/C/D/E/F/G/H	1-332	[»]

ProteinModelPortal

Q9CF33.

SMR

Q9CF33. Positions 7-56, 58-332.

ModBase

Search...

Protein-protein interaction databases

STRING

272623.L0143.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

AAK05746; AAK05746; L0143.

GeneID

1115308.

KEGG

lla:L0143.

PATRIC

22295728. VBILacLac136773_1770.

Phylogenomic databases

HOGENOM

HOG000220180.

KO

K02529.

OMA

HEIISRR.

ProtClustDB

CLSK697860.

Enzyme and pathway databases

BioCyc

LLAC272623:GHSH-1788-MONOMER.

Family and domain databases

Gene3D

1.10.260.40. 1 hit.

InterPro

IPR006377. CcpA.
IPR010982. Lambda_DNA-bd_dom.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]

Pfam

PF00356. LacI. 1 hit.
[Graphical view]

PRINTS

PR00036. HTHLACI.

SMART

SM00354. HTH_LACI. 1 hit.
[Graphical view]

SUPFAM

SSF47413. Lambda_like_DNA. 1 hit.

TIGRFAMs

TIGR01481. ccpA. 1 hit.

PROSITE

PS00356. HTH_LACI_1. 1 hit.
PS50932. HTH_LACI_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Other

EvolutionaryTrace

Q9CF33.

Entry information

Entry name

Q9CF33_LACLA

Accession

Primary (citable) accession number: Q9CF33

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2001
Last sequence update:	June 1, 2001
Last modified:	May 1, 2013
This is version 76 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)