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Protein

50S ribosomal protein L25

Gene

rplY

Organism
Mycobacterium leprae (strain TN)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciMLEP272631:G1GT5-277-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L25UniRule annotation
Alternative name(s):
General stress protein CTCUniRule annotation
Gene namesi
Name:rplYUniRule annotation
Synonyms:ctcUniRule annotation
Ordered Locus Names:ML0245
OrganismiMycobacterium leprae (strain TN)
Taxonomic identifieri272631 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000000806 Componenti: Chromosome

Organism-specific databases

LepromaiML0245

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001815681 – 21550S ribosomal protein L25Add BLAST215

Proteomic databases

PRIDEiQ9CD48

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.UniRule annotation

Protein-protein interaction databases

STRINGi272631.ML0245

Structurei

3D structure databases

ProteinModelPortaliQ9CD48
SMRiQ9CD48
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG1825 LUCA
HOGENOMiHOG000214908
KOiK02897
OMAiGDSIHIS
OrthoDBiPOG091H03T9

Family and domain databases

CDDicd00495 Ribosomal_L25_TL5_CTC, 1 hit
Gene3Di2.170.120.20, 1 hit
2.40.240.10, 1 hit
HAMAPiMF_01334 Ribosomal_L25_CTC, 1 hit
InterProiView protein in InterPro
IPR020056 Rbsml_L25/Gln-tRNA_synth_N
IPR029751 Ribosomal_L25
IPR011035 Ribosomal_L25/Gln-tRNA_synth
IPR020057 Ribosomal_L25_b-dom
IPR037121 Ribosomal_L25_C
IPR001021 Ribosomal_L25_long
PfamiView protein in Pfam
PF01386 Ribosomal_L25p, 1 hit
PF14693 Ribosomal_TL5_C, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012503 Ribosomal_L25, 1 hit
SUPFAMiSSF50715 SSF50715, 1 hit
TIGRFAMsiTIGR00731 bL25_bact_ctc, 1 hit

Sequencei

Sequence statusi: Complete.

Q9CD48-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKSTVNKLS VSVRTNTGKG ASRRARRDGK VPAVLYGHGE EPQHLELPAH
60 70 80 90 100
AFSAVLRHVG TNAVLTLEVA GKEQLALTKA IDVHPIRHTI MHADLLVVRS
110 120 130 140 150
GEKIVVEVPV EVEGDAGPDI LVTQETTSIE IEAEALSIPE QLTMSIEGAE
160 170 180 190 200
PGTQFTARQI PLPVGVTLVS DPEMLVVNVV NAPTDAQTKA KYAGEAHEAP
210
EVGTAENKTA ATESE
Length:215
Mass (Da):22,783
Last modified:April 27, 2001 - v1
Checksum:iB5564D05E813B050
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL583917 Genomic DNA Translation: CAC29753.1
PIRiE86939
RefSeqiNP_301304.1, NC_002677.1
WP_010907628.1, NC_002677.1

Genome annotation databases

EnsemblBacteriaiCAC29753; CAC29753; CAC29753
GeneIDi908726
KEGGimle:ML0245
PATRICifig|272631.5.peg.379

Similar proteinsi

Entry informationi

Entry nameiRL25_MYCLE
AccessioniPrimary (citable) accession number: Q9CD48
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: April 27, 2001
Last modified: May 23, 2018
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
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